RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 TRAF3IP2O43734 574 aaPredicted RBP9.75□□□□□ -0.85
CDH4-201ENST00000543233 HBE1P02100 147 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 ZNF43P17038 809 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 EPHA8P29322 1005 aaPredicted RBP9.75□□□□□ -0.85
CDH4-201ENST00000543233 TSPOP30536 169 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 LGALS7P47929 136 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 GNMTQ14749 295 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 FAM78BQ5VT40 261 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 CARD17Q5XLA6 110 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 CDC20BQ86Y33 519 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 PLK3Q9H4B4 646 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 CALHM2Q9HA72 323 aa9.75□□□□□ -0.85
CDH4-201ENST00000543233 LOC102723971A0A1B0GUV8 181 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 PRSS37A4D1T9 235 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 SCRG1O75711 98 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 PAX2Q02962 417 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 MFGE8Q08431 387 aaPredicted RBP9.74□□□□□ -0.85
CDH4-201ENST00000543233 SP6Q3SY56 376 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 KIAA2026Q5HYC2 2103 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 SIGLECL1Q8N7X8 197 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 SLAMF6Q96DU3 332 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 GPX7Q96SL4 187 aaPredicted RBP9.74□□□□□ -0.85
CDH4-201ENST00000543233 RBFOX2O43251 390 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDH4-201ENST00000543233 SLC6A8P48029 635 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 RPL27P61353 136 aaKnown RBP9.74□□□□□ -0.85
CDH4-201ENST00000543233 ZNF266Q14584 549 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 MSMO1Q15800 293 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 TMEM225Q6GV28 225 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 KCNIP4Q6PIL6 250 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 KLHDC1Q8N7A1 406 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 CPT1CQ8TCG5 803 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 FAM71F1Q96KD3 344 aaPredicted RBP9.74□□□□□ -0.85
CDH4-201ENST00000543233 EMC9Q9Y3B6 208 aa9.74□□□□□ -0.85
CDH4-201ENST00000543233 FAM24AA6NFZ4 105 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 SH2D1BO14796 132 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 SERF1AO75920 110 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 CYC1P08574 325 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 IFI6P09912 130 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 CD99P14209 185 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 TCN2P20062 427 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 SFTPDP35247 375 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 ZFP36L1Q07352 338 aaKnown RBP9.73□□□□□ -0.85
CDH4-201ENST00000543233 IL15RAQ13261 267 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 LPAL2Q16609 132 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 MORN2Q502X0 79 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 ZNF684Q5T5D7 378 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 TMEM144Q7Z5S9 345 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 CISD2Q8N5K1 135 aaKnown RBP9.73□□□□□ -0.85
CDH4-201ENST00000543233 SUMF1Q8NBK3 374 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 RTBDNQ9BSG5 229 aaPredicted RBP9.73□□□□□ -0.85
CDH4-201ENST00000543233 ZDHHC11Q9H8X9 412 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 PILRBQ9UKJ0 227 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 IGKV1D-43A0A0B4J1Z2 117 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 A0A1W2PNR3 127 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 LMX1BO60663 402 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 ABHD16AO95870 558 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 HPNP05981 417 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 CCL7P80098 99 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 KRTCAP3Q53RY4 240 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 ZNF787Q6DD87 383 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 TCF23Q7RTU1 214 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 OR8I2Q8N0Y5 310 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 OR2Y1Q8NGV0 311 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 OTOSQ8NHW6 89 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 ATP6V0BQ99437 205 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 LOC101059948A0A1B0GTJ6 334 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 LRRC3CA6NJW4 275 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 NPIPA5E9PKD4 350 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 PMCHP20382 165 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 GNRHRP30968 328 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 PTGER4P35408 488 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 CSNK1A1P48729 337 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 EMP2P54851 167 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 UBE2NP61088 152 aaKnown RBP9.73□□□□□ -0.85
CDH4-201ENST00000543233 CSNK2A1P68400 391 aaPredicted RBP9.73□□□□□ -0.85
CDH4-201ENST00000543233 C1orf174Q8IYL3 243 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 LGI3Q8N145 548 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 SPEM1Q8N4L4 309 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 TCTEX1D1Q8N7M0 179 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 CSNK2A3Q8NEV1 391 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 RPS4Y2Q8TD47 263 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 RHBDD1Q8TEB9 315 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 SFRP2Q96HF1 295 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 NPIPA1Q9UND3 350 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 B3GALT5Q9Y2C3 310 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 WASHC3Q9Y3C0 194 aa9.73□□□□□ -0.85
CDH4-201ENST00000543233 LOC400499M0QZD8 3231 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 EP300Q09472 2414 aaPredicted RBP9.72□□□□□ -0.85
CDH4-201ENST00000543233 A0A1W2PQM1 296 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 YPEL1O60688 119 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 CELA2AP08217 269 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 MSR1P21757 451 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 UCP1P25874 307 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 ZNF93P35789 620 aaPredicted RBP9.72□□□□□ -0.85
CDH4-201ENST00000543233 ZNF83P51522 516 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 PAFAH1B2P68402 229 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 SGCBQ16585 318 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 SHISA2Q6UWI4 295 aa9.72□□□□□ -0.85
CDH4-201ENST00000543233 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.72□□□□□ -0.85
CDH4-201ENST00000543233 OR10G3Q8NGC4 313 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms