RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 AQP3Q92482 292 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 MRGPRFQ96AM1 343 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 C18orf12Q96KH6 178 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 CXorf58Q96LI9 332 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 DERL3Q96Q80 235 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 GPER1Q99527 375 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 METTL17Q9H7H0 456 aaPredicted RBP4.23□□□□□ -1.73
CLIP1-217ENST00000543205 ZNF696Q9H7X3 374 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 NOX4Q9NPH5 578 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 CLEC5AQ9NY25 188 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 SLC2A8Q9NY64 477 aa4.23□□□□□ -1.73
CLIP1-217ENST00000543205 CSDC2Q9Y534 153 aaKnown RBP4.23□□□□□ -1.73
CLIP1-217ENST00000543205 IGKV1-27A0A075B6S5 117 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 TRBV5-7A0A0A0MS05 114 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 TRAV38-1A0A0B4J264 116 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 CCRL2O00421 344 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 WNT9BO14905 357 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 FSTL3O95633 263 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 LHBP01229 141 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 MAS1P04201 325 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 MUC1P15941 1255 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-217ENST00000543205 GLRA1P23415 457 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 BDKRB2P30411 391 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 CFHR2P36980 270 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 MICBQ29980 383 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 TMEM155Q4W5P6 130 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 FAM201AQ5SY85 155 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 UNQ9370/PRO34162Q6UXP9 181 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 SLC25A26Q70HW3 274 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 MKXQ8IYA7 352 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 CIARTQ8N365 385 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-217ENST00000543205 GCSAMQ8N6F7 178 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 C19orf18Q8NEA5 215 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 CLDND2Q8NHS1 167 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 RAB39BQ96DA2 213 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 ZNF503Q96F45 646 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 C8orf49Q96NF6 230 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 SPACA5Q96QH8 159 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 SLITRK2Q9H156 845 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 ZNF665Q9H7R5 613 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 TMEM138Q9NPI0 162 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 NDUFB11Q9NX14 153 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 RASL12Q9NYN1 266 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 TRAV8-7A0A075B6U6 113 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 IGHV3OR15-7A0A075B7D8 119 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 A0A096LNT2 108 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 DPPA5A6NC42 116 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 SRRM5B3KS81 715 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 TRAPPC2LH3BP13 241 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 CCL24O00175 119 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 GABRPO00591 440 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 NDUFA2O43678 99 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 SYNGR1O43759 233 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 GPX5O75715 221 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 ARL6IP5O75915 188 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 NXPH2O95156 264 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 ALDOBP05062 364 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 IGFBP3P17936 291 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-217ENST00000543205 ZNF93P35789 620 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-217ENST00000543205 P2RX3P56373 397 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 HOXA4Q00056 320 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-217ENST00000543205 FABP5Q01469 135 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 INSL4Q14641 139 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 KISS1Q15726 138 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 SSX1Q16384 188 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 TATDN3Q17R31 274 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 ZNF404Q494X3 552 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 HSD17B12Q53GQ0 312 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 AWAT1Q58HT5 328 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 SYT6Q5T7P8 510 aaPredicted RBP4.22□□□□□ -1.73
CLIP1-217ENST00000543205 DDI2Q5TDH0 399 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 TEX36Q5VZQ5 186 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 CYB5R2Q6BCY4 276 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 DCDC5Q6ZRR9 648 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 Q6ZSN1 163 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 CALHM1Q8IU99 346 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 PNLDC1Q8NA58 520 aaKnown RBP4.22□□□□□ -1.73
CLIP1-217ENST00000543205 POC1AQ8NBT0 407 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 OR51A2Q8NGJ7 313 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 OR5D18Q8NGL1 313 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 OR51F2Q8NH61 342 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 CEP19Q96LK0 163 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 WWC2-AS2Q96NR7 200 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 S100A13Q99584 98 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 Q9H8V8 135 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 PIPOXQ9P0Z9 390 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 MIOXQ9UGB7 285 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 ACANP16112 2415 aa4.22□□□□□ -1.73
CLIP1-217ENST00000543205 DYSFO75923 2080 aa4.21□□□□□ -1.73
CLIP1-217ENST00000543205 CSPG4Q6UVK1 2322 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 TRDV1A0A1B0GX56 115 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 FBLL1A6NHQ2 334 aaKnown RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 NKX6-3A6NJ46 265 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 CEACAM18A8MTB9 384 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 PIN1P1O15428 100 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 NOS1APO75052 506 aaPredicted RBP4.21□□□□□ -1.74
CLIP1-217ENST00000543205 SC5DO75845 299 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 IGHV2-5P01817 119 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 GYPAP02724 150 aa4.21□□□□□ -1.74
CLIP1-217ENST00000543205 SFTPBP07988 381 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms