RNA–Protein interactions for RNA: ENST00000543120.5

PTPN6-221, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-221ENST00000543120 Q6ZPA2 131 aa13.17□□□□□ -0.3
PTPN6-221ENST00000543120 SLC25A48Q6ZT89 311 aaKnown RBP13.17□□□□□ -0.3
PTPN6-221ENST00000543120 C6orf201Q7Z4U5 140 aa13.17□□□□□ -0.3
PTPN6-221ENST00000543120 C5orf56Q8N8D9 126 aa13.17□□□□□ -0.3
PTPN6-221ENST00000543120 OR52L2PQ8NGH6 319 aa13.17□□□□□ -0.3
PTPN6-221ENST00000543120 MGLLQ99685 303 aa13.17□□□□□ -0.3
PTPN6-221ENST00000543120 VCX3BQ9H321 246 aa13.17□□□□□ -0.3
PTPN6-221ENST00000543120 AK6Q9Y3D8 172 aaKnown RBP13.17□□□□□ -0.3
PTPN6-221ENST00000543120 TET2Q6N021 2002 aaPredicted RBP13.17□□□□□ -0.3
PTPN6-221ENST00000543120 LINC01548A6NM66 108 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 M0QZK8 103 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 CA11O75493 328 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 GNMTQ14749 295 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 KCNG3Q8TAE7 436 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 RTN4IP1Q8WWV3 396 aaPredicted RBP13.16□□□□□ -0.3
PTPN6-221ENST00000543120 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 EAF1Q96JC9 268 aaPredicted RBP13.16□□□□□ -0.3
PTPN6-221ENST00000543120 NEDD4LQ96PU5 975 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 TM2D1Q9BX74 207 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 TMEM59Q9BXS4 323 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 GNG12Q9UBI6 72 aa13.16□□□□□ -0.3
PTPN6-221ENST00000543120 ATP6V1G2O95670 118 aa13.15□□□□□ -0.3
PTPN6-221ENST00000543120 HSPA13P48723 471 aa13.15□□□□□ -0.3
PTPN6-221ENST00000543120 SSX1Q16384 188 aa13.15□□□□□ -0.3
PTPN6-221ENST00000543120 Q3ZCU0 254 aa13.15□□□□□ -0.3
PTPN6-221ENST00000543120 MORN2Q502X0 79 aa13.15□□□□□ -0.3
PTPN6-221ENST00000543120 Q8N6K4 173 aa13.15□□□□□ -0.3
PTPN6-221ENST00000543120 OR2S2Q9NQN1 319 aa13.15□□□□□ -0.3
PTPN6-221ENST00000543120 PLSCR3Q9NRY6 295 aa13.15□□□□□ -0.3
PTPN6-221ENST00000543120 PRKDCP78527 4128 aaKnown RBP13.14□□□□□ -0.31
PTPN6-221ENST00000543120 TCRBV4S1A1TA0A5B7 111 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 SOCS1O15524 211 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 BPNT1O95861 308 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 PPP1CCP36873 323 aaKnown RBP13.14□□□□□ -0.31
PTPN6-221ENST00000543120 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 TRAT1Q6PIZ9 186 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 ZNF329Q86UD4 541 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 OR6M1Q8NGM8 313 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-221ENST00000543120 LPAR5Q9H1C0 372 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 KCNIP1Q9NZI2 227 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 LINC00527Q9UJ94 153 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 RAB26Q9ULW5 256 aa13.14□□□□□ -0.31
PTPN6-221ENST00000543120 SLC17A2O00624 439 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 CALRP27797 417 aaKnown RBP13.13□□□□□ -0.31
PTPN6-221ENST00000543120 BLVRBP30043 206 aaPredicted RBP13.13□□□□□ -0.31
PTPN6-221ENST00000543120 ZNF137PP52743 207 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 CLDN12P56749 244 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 TRAM1Q15629 374 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 BEAN1Q3B7T3 259 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 SAMD5Q5TGI4 173 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 ODF3L1Q8IXM7 274 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 IZUMO1Q8IYV9 350 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 FAM89BQ8N5H3 189 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 ACOT13Q9NPJ3 140 aa13.13□□□□□ -0.31
PTPN6-221ENST00000543120 SHISA3A0PJX4 238 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 NCBP2LA6PVI3 153 aaKnown RBP13.12□□□□□ -0.31
PTPN6-221ENST00000543120 FOXI3A8MTJ6 420 aaPredicted RBP13.12□□□□□ -0.31
PTPN6-221ENST00000543120 FGF16O43320 207 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 NAPSAO96009 420 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 ARSBP15848 533 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
PTPN6-221ENST00000543120 IL3RAP26951 378 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 CD1BP29016 333 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 F2RL1P55085 397 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 TMEM50BP56557 158 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 HTD2P86397 168 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 HMGN3Q15651 99 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 TBCEQ15813 527 aaPredicted RBP13.12□□□□□ -0.31
PTPN6-221ENST00000543120 RAB11BQ15907 218 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 C2orf76Q3KRA6 126 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 TMEM30BQ3MIR4 351 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 OXLD1Q5BKU9 147 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 STEAP3Q658P3 488 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 ZNF880Q6PDB4 577 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 Q8N9W7 124 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 OR4F17Q8NGA8 305 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 OR51D1Q8NGF3 324 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 RITA1Q96K30 269 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 OR4F4Q96R69 305 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 HDHD3Q9BSH5 251 aaPredicted RBP13.12□□□□□ -0.31
PTPN6-221ENST00000543120 PLGRKTQ9HBL7 147 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 RAB9BQ9NP90 201 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 PLEKHJ1Q9NW61 149 aa13.12□□□□□ -0.31
PTPN6-221ENST00000543120 NOTCH1P46531 2555 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 ARL6IP5O75915 188 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 MOSP00540 346 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 PRB2P02812 416 aaPredicted RBP13.11□□□□□ -0.31
PTPN6-221ENST00000543120 KPRPQ5T749 579 aaPredicted RBP13.11□□□□□ -0.31
PTPN6-221ENST00000543120 ZNF367Q7RTV3 350 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 OR2W3Q7Z3T1 314 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 ZNF554Q86TJ5 538 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 TGIF2LXQ8IUE1 241 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 GALMQ96C23 342 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 AK3Q9UIJ7 227 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 JPT1Q9UK76 154 aa13.11□□□□□ -0.31
PTPN6-221ENST00000543120 TSSC4Q9Y5U2 329 aaPredicted RBP13.11□□□□□ -0.31
PTPN6-221ENST00000543120 PSMB11A5LHX3 300 aa13.1□□□□□ -0.31
PTPN6-221ENST00000543120 SERPINE3A8MV23 424 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms