RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 SMAD5-AS1Q9Y6J3 95 aa3.27□□□□□ -1.89
MDM2-229ENST00000543046 KIAA1671Q9BY89 1806 aa3.27□□□□□ -1.89
MDM2-229ENST00000543046 ZNF236Q9UL36 1845 aa3.27□□□□□ -1.89
MDM2-229ENST00000543046 MYO10Q9HD67 2058 aa3.27□□□□□ -1.89
MDM2-229ENST00000543046 WDR90Q96KV7 1748 aa3.27□□□□□ -1.89
MDM2-229ENST00000543046 NYNRINQ9P2P1 1898 aaKnown RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 COL11A1P12107 1806 aaPredicted RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 A0A087WZ39 114 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 IGKV6D-21A0A0A0MT36 114 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 BORCS7-ASMTA0A0B4J1R7 106 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 RBFOX3A6NFN3 312 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 FAM166BA8MTA8 275 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 CEACAM18A8MTB9 384 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZNF727A8MUV8 499 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZNF705FA8MVS1 300 aaPredicted RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 TRAPPC2LH3BP13 241 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 K7EQD1 137 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 AGPAT2O15120 278 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 TBX19O60806 448 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 SAP30O75446 220 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 RHBDL1O75783 438 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 B3GAT3O94766 335 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 SEMA4FO95754 770 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 TXNDC12O95881 172 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 CXCL10P02778 98 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 REG1AP05451 166 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 OR5G3P0C626 314 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 OR10J4P0C629 311 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZNF705DP0CH99 300 aaPredicted RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZNF705BP0CI00 300 aaPredicted RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 SMIM17P0DL12 118 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 AREGP15514 252 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZNF19P17023 458 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 CSNK2A2P19784 350 aaPredicted RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 TCN2P20062 427 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 GATA2P23769 480 aaPredicted RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 AQP1P29972 269 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 NSG1P42857 185 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 CEBPDP49716 269 aaPredicted RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 SLC25A1P53007 311 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 CLDN17P56750 224 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 PAX8Q06710 450 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ST3GAL3Q11203 375 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 IL24Q13007 206 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ELOCQ15369 112 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 HNRNPA1L2Q32P51 320 aaKnown RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 EIPR1Q53HC9 387 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 TCTEX1D4Q5JR98 221 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZNF506Q5JVG8 444 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ATP1A1-AS1Q5TC04 95 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 GPR157Q5UAW9 335 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 C1orf189Q5VU69 101 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 SAMD13Q5VXD3 122 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 RPL7L1Q6DKI1 246 aaKnown RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 FAM166AQ6J272 317 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 LEG1Q6P5S2 330 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 LRRC70Q7Z2Q7 622 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 CLECL1Q8IZS7 167 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 Q8N377 158 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 SIDT2Q8NBJ9 832 aaKnown RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 APCDD1LQ8NCL9 501 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 GPR32P1Q8NGA4 272 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 OR4B1Q8NGF8 309 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 OR52M1Q8NGK5 317 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 OR1K1Q8NGR3 316 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 OR6K2Q8NGY2 324 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 OR2T27Q8NH04 317 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 MFSD8Q8NHS3 518 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 TSEN15Q8WW01 171 aaKnown RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 TMEM239Q8WW34 195 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 MAL2Q969L2 176 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 PTX4Q96A99 478 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 SMIM19Q96E16 107 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 PRRC1Q96M27 445 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 SCGB3A2Q96PL1 93 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 OR7D2Q96RA2 312 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZNF607Q96SK3 696 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 SLC6A7Q99884 636 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 GABRG3Q99928 467 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 DCTN5Q9BTE1 182 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZDHHC6Q9H6R6 413 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 BCL2L10Q9HD36 194 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 PIGVQ9NUD9 493 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 TMEM106BQ9NUM4 274 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 ZNF319Q9P2F9 582 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 C14orf166Q9Y224 244 aaKnown RBP3.26□□□□□ -1.89
MDM2-229ENST00000543046 SLC22A13Q9Y226 551 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 LAMTOR2Q9Y2Q5 125 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 RALGAPA2Q2PPJ7 1873 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 TRPM7Q96QT4 1865 aa3.26□□□□□ -1.89
MDM2-229ENST00000543046 PLXNA3P51805 1871 aa3.25□□□□□ -1.89
MDM2-229ENST00000543046 ZNF106Q9H2Y7 1883 aaKnown RBP3.25□□□□□ -1.89
MDM2-229ENST00000543046 A0A087X0K7 114 aa3.25□□□□□ -1.89
MDM2-229ENST00000543046 TRAV1-1A0A0B4J248 108 aa3.25□□□□□ -1.89
MDM2-229ENST00000543046 IGKV6-21A0A0C4DH24 114 aa3.25□□□□□ -1.89
MDM2-229ENST00000543046 MAP1LC3B2A6NCE7 125 aa3.25□□□□□ -1.89
MDM2-229ENST00000543046 NKX2-6A6NCS4 301 aa3.25□□□□□ -1.89
MDM2-229ENST00000543046 OR6C6A6NF89 314 aa3.25□□□□□ -1.89
MDM2-229ENST00000543046 ZNF860A6NHJ4 632 aa3.25□□□□□ -1.89
MDM2-229ENST00000543046 OR5B21A6NL26 309 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms