RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 AQP5P55064 265 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 CD164Q04900 197 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 VAMP3Q15836 100 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 LGALS9CQ6DKI2 356 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 EBLN2Q6P2I7 272 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 AHSA2Q719I0 299 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 LRRC6Q86X45 466 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 ZBTB8OSQ8IWT0 167 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 SELENOHQ8IZQ5 122 aaKnown RBP0.71□□□□□ -2.3
KNTC1-213ENST00000542727 CDRT4Q8N9R6 151 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 OR11L1Q8NGX0 322 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 OR4X1Q8NH49 305 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 DTD1Q8TEA8 209 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 GTF2H4Q92759 462 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 MGLLQ99685 303 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 XKR8Q9H6D3 395 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 C11orf49Q9H6J7 331 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 DMAC2Q9NW81 257 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 TXNL4BQ9NX01 149 aaKnown RBP0.71□□□□□ -2.3
KNTC1-213ENST00000542727 DENND4BO75064 1496 aaPredicted RBP0.71□□□□□ -2.3
KNTC1-213ENST00000542727 CCDC88AQ3V6T2 1871 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 HEATR5AQ86XA9 2040 aa0.71□□□□□ -2.3
KNTC1-213ENST00000542727 RAB3GAP2Q9H2M9 1393 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 BOLA2-SMG1P6H3BVE0 249 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 POLR3GO15318 223 aaPredicted RBP0.7□□□□□ -2.3
KNTC1-213ENST00000542727 DENRO43583 198 aaKnown RBP0.7□□□□□ -2.3
KNTC1-213ENST00000542727 LY6HO94772 140 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 SLC25A16P16260 332 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 PEBP1P30086 187 aaKnown RBP0.7□□□□□ -2.3
KNTC1-213ENST00000542727 CD200P41217 278 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 AKR1C2P52895 323 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 CARD18P57730 90 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 SLC35A2P78381 396 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 PDGFRLQ15198 375 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 BSXQ3C1V8 233 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 FAM162BQ5T6X4 162 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 TRIML2Q8N7C3 387 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 OR11H1Q8NG94 326 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 OR4X2Q8NGF9 303 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 FAM45AQ8TCE6 357 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 C16orf78Q8WTQ4 265 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 FGF13Q92913 245 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 CIDECQ96AQ7 238 aaPredicted RBP0.7□□□□□ -2.3
KNTC1-213ENST00000542727 GALMQ96C23 342 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 MRAP2Q96G30 205 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 MED18Q9BUE0 208 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 RAB1BQ9H0U4 201 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 OR51E2Q9H255 320 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 PSORS1C2Q9UIG4 136 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 DNAJC12Q9UKB3 198 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 SNX24Q9Y343 169 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 AMMECR1Q9Y4X0 333 aaPredicted RBP0.7□□□□□ -2.3
KNTC1-213ENST00000542727 MTCH2Q9Y6C9 303 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 MICAL3Q7RTP6 2002 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 SIPA1L1O43166 1804 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 FREM1Q5H8C1 2179 aa0.7□□□□□ -2.3
KNTC1-213ENST00000542727 SDK1Q7Z5N4 2213 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 MUC21A0A0G2JKD1 596 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 MUC21A0A140T8X8 626 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 A0A1B0GVG6 124 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 EFCAB9A8MZ26 197 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 J3QQQ9 107 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 NDUFS8O00217 210 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 GPR171O14626 319 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 CYTH3O43739 400 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 GPX1P07203 203 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 FBP1P09467 338 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 ESDP10768 282 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 GADD45AP24522 165 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 ACTBP60709 375 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 RPL26P61254 145 aaKnown RBP0.69□□□□□ -2.3
KNTC1-213ENST00000542727 ACTG1P63261 375 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 FLOT2Q14254 428 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 PAFAH1B3Q15102 231 aaKnown RBP0.69□□□□□ -2.3
KNTC1-213ENST00000542727 C18orf21Q32NC0 220 aaPredicted RBP0.69□□□□□ -2.3
KNTC1-213ENST00000542727 OR10J3Q5JRS4 329 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 RASL11AQ6T310 242 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 VN1R4Q7Z5H5 301 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 DOLPP1Q86YN1 238 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 SLC35F6Q8N357 371 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 MRPS24Q96EL2 167 aaKnown RBP0.69□□□□□ -2.3
KNTC1-213ENST00000542727 MBOAT7Q96N66 472 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 SMDT1Q9H4I9 107 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 C16orf95Q9H693 158 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 FBXL3Q9UKT7 428 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 SCML1Q9UN30 329 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 PSMD13Q9UNM6 376 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 RPL26L1Q9UNX3 145 aaKnown RBP0.69□□□□□ -2.3
KNTC1-213ENST00000542727 FIS1Q9Y3D6 152 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 CHTOPQ9Y3Y2 248 aaKnown RBP0.69□□□□□ -2.3
KNTC1-213ENST00000542727 ALG5Q9Y673 324 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 RTEL1-TNFRSF6BF6WH68 1400 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 DLG5Q8TDM6 1919 aa0.69□□□□□ -2.3
KNTC1-213ENST00000542727 COL6A6A6NMZ7 2263 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 IGLV3-9A0A075B6K5 115 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 IGHV3-73A0A0B4J1V6 119 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 LINC00862A6NCI5 91 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 ARRDC5A6NEK1 342 aa0.68□□□□□ -2.3
KNTC1-213ENST00000542727 CRXO43186 299 aaPredicted RBP0.68□□□□□ -2.3
KNTC1-213ENST00000542727 LDOC1O95751 146 aaPredicted RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms