RNA–Protein interactions for RNA: ENST00000542274.5

CDH3-203, Transcript of cadherin 3, humanhuman

TSL 2

Gene CDH3, Length 2,746 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-203ENST00000542274 OR5W2Q8NH69 310 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 PIGTQ969N2 578 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 PTH2Q96A98 100 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 PSMG3Q9BT73 122 aaPredicted RBP9.58□□□□□ -0.88
CDH3-203ENST00000542274 HHLA2Q9UM44 414 aa9.58□□□□□ -0.88
CDH3-203ENST00000542274 PRR32B1ATL7 298 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 FTCDNL1E5RQL4 147 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 MSTNO14793 375 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 TAAR5O14804 337 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 NDUFB2O95178 105 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 PMS2P2O95744 297 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 CER1O95813 267 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 CLDN1O95832 211 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 RAB40ALP0C0E4 278 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 PTHLHP12272 177 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 CDKN1AP38936 164 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 DNASE1L1P49184 302 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 ZNF117Q03924 483 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 CST9LP1Q5W188 147 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 SLAMF6Q96DU3 332 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 MED12Q93074 2177 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 EP300Q09472 2414 aaPredicted RBP9.57□□□□□ -0.88
CDH3-203ENST00000542274 H3BSH0 61 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 VENTXO95231 258 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 CSN2P05814 226 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 IFI6P09912 130 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 PPICP45877 212 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 RND2P52198 227 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 MFAP4P55083 255 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 GNG3P63215 75 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 ACSM3Q53FZ2 586 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 ZNF766Q5HY98 468 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 SLC23A3Q6PIS1 610 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 NPEPL1Q8NDH3 523 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 ZNF563Q8TA94 476 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 TMEM37Q8WXS4 190 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 CHRDL1Q9BU40 450 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 AKIRIN1Q9H9L7 192 aaPredicted RBP9.57□□□□□ -0.88
CDH3-203ENST00000542274 NOX4Q9NPH5 578 aa9.57□□□□□ -0.88
CDH3-203ENST00000542274 MRPS28Q9Y2Q9 187 aaKnown RBP9.57□□□□□ -0.88
CDH3-203ENST00000542274 NUP210LQ5VU65 1888 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 PRSS37A4D1T9 235 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 NUDT14O95848 222 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 CD34P28906 385 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 SUMO1P63165 101 aaKnown RBP9.56□□□□□ -0.88
CDH3-203ENST00000542274 PMPCAQ10713 525 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 TMEM41BQ5BJD5 291 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 Q6ZWC4 215 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 CMTM4Q8IZR5 234 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 TVP23CQ96ET8 276 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 OCIAD1Q9NX40 245 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 NOP16Q9Y3C1 178 aaKnown RBP9.56□□□□□ -0.88
CDH3-203ENST00000542274 OR6C6A6NF89 314 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 CLDN34H7C241 214 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 FAUP35544 74 aaKnown RBP9.56□□□□□ -0.88
CDH3-203ENST00000542274 CD300EQ496F6 205 aaPredicted RBP9.56□□□□□ -0.88
CDH3-203ENST00000542274 ZNF880Q6PDB4 577 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 LINC00696Q6ZRV3 163 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 UEVLDQ8IX04 471 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 TCTEX1D1Q8N7M0 179 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 ABHD4Q8TB40 342 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 TMEM170AQ8WVE7 144 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 ZC2HC1AQ96GY0 325 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 PGLYRP3Q96LB9 341 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 PDCD1LG2Q9BQ51 273 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 CABLES2Q9BTV7 478 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 RSG1Q9BU20 258 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 MRPL16Q9NX20 251 aaKnown RBP9.56□□□□□ -0.88
CDH3-203ENST00000542274 HSPB8Q9UJY1 196 aa9.56□□□□□ -0.88
CDH3-203ENST00000542274 CSDC2Q9Y534 153 aaKnown RBP9.56□□□□□ -0.88
CDH3-203ENST00000542274 MSGN1A6NI15 193 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 CELA3AP09093 270 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 CLDN6P56747 220 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 ZFP36L1Q07352 338 aaKnown RBP9.55□□□□□ -0.88
CDH3-203ENST00000542274 FOXF1Q12946 379 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 ZNF74Q16587 644 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 NRN1LQ496H8 165 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 TMEM128Q5BJH2 165 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 RPL7L1Q6DKI1 246 aaKnown RBP9.55□□□□□ -0.88
CDH3-203ENST00000542274 PWWP2BQ6NUJ5 590 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 MOGAT3Q86VF5 341 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 OR4C16Q8NGL9 310 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 FNDC9Q8TBE3 224 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 SIGLEC12Q96PQ1 595 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 PLK3Q9H4B4 646 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 TRIM36Q9NQ86 728 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.55□□□□□ -0.88
CDH3-203ENST00000542274 B3GALT1Q9Y5Z6 326 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 KMT2EQ8IZD2 1858 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 ZNF318Q5VUA4 2279 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 A0A1B0GX78 115 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 C11orf98E9PRG8 122 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 RAB27BO00194 218 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 HS3ST1O14792 307 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 TRAF3IP2O43734 574 aaPredicted RBP9.55□□□□□ -0.88
CDH3-203ENST00000542274 C1QTNF9P0C862 333 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 CLDN15P56746 228 aa9.55□□□□□ -0.88
CDH3-203ENST00000542274 SRSF1Q07955 248 aaKnown RBP eCLIP9.55□□□□□ -0.88
CDH3-203ENST00000542274 LCN10Q6JVE6 187 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms