RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 MOB3AQ96BX8 217 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 ZNF837Q96EG3 531 aaPredicted RBP7.81□□□□□ -1.16
THBS3-211ENST00000541990 ZPBPQ9BS86 351 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 SCNM1Q9BWG6 230 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 PLEKHF2Q9H8W4 249 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 PITPNC1Q9UKF7 332 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 LAMP3Q9UQV4 416 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 POLEQ07864 2286 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 A0A0J9YW62 118 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 A6NNC1 897 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 MPPED1O15442 326 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 CA11O75493 328 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 GNRHRP30968 328 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 NTF4P34130 210 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 CEACAM6P40199 344 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 ZNF133P52736 654 aaPredicted RBP7.81□□□□□ -1.16
THBS3-211ENST00000541990 PAX9P55771 341 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 ENDOGQ14249 297 aaKnown RBP7.81□□□□□ -1.16
THBS3-211ENST00000541990 DAZAP2Q15038 168 aaPredicted RBP7.81□□□□□ -1.16
THBS3-211ENST00000541990 FAM189A2Q15884 450 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 ABLIM2Q6H8Q1 611 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.81□□□□□ -1.16
THBS3-211ENST00000541990 OR8G5Q8NG78 346 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 ZNF385AQ96PM9 386 aaKnown RBP7.81□□□□□ -1.16
THBS3-211ENST00000541990 HIST1H2AAQ96QV6 131 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 SYT3Q9BQG1 590 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 SRXN1Q9BYN0 137 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 SDF2L1Q9HCN8 221 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 RPRMQ9NS64 109 aa7.81□□□□□ -1.16
THBS3-211ENST00000541990 CHD3Q12873 2000 aaKnown RBP7.81□□□□□ -1.16
THBS3-211ENST00000541990 TNRC6AQ8NDV7 1962 aaKnown RBP7.8□□□□□ -1.16
THBS3-211ENST00000541990 XKRY2A2RUG3 117 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 DVL1O14640 695 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 CHST1O43916 411 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 PPYP01298 95 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 CLDN15P56746 228 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 GNB2P62879 340 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 EIF3IQ13347 325 aaKnown RBP7.8□□□□□ -1.16
THBS3-211ENST00000541990 SPIN3Q5JUX0 258 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 C16orf82Q7Z2V1 217 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 SELENOHQ8IZQ5 122 aaKnown RBP7.8□□□□□ -1.16
THBS3-211ENST00000541990 RAB24Q969Q5 203 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 SLC7A10Q9NS82 523 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 IGKV1D-13A0A0B4J2D9 117 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 A0A1W2PR80 420 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 C3orf80F5H4A9 247 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 HSPA12AO43301 675 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 CXCL13O43927 109 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 IGKV1-13P0DP09 117 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 BCL2P10415 239 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 CEACAM1P13688 526 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 VAMP2P63027 116 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 MRPS34P82930 218 aaKnown RBP7.8□□□□□ -1.16
THBS3-211ENST00000541990 SLC10A1Q14973 349 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 ADIRFQ15847 76 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 ZNF818PQ6ZRF7 136 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 ZNF695Q8IW36 515 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 ARL6IP6Q8N6S5 226 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 ANGPTL4Q9BY76 406 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 TMEM222Q9H0R3 208 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 METTL9Q9H1A3 318 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 UBE2J1Q9Y385 318 aaPredicted RBP7.8□□□□□ -1.16
THBS3-211ENST00000541990 EXPH5Q8NEV8 1989 aa7.8□□□□□ -1.16
THBS3-211ENST00000541990 COL5A1P20908 1838 aaPredicted RBP7.8□□□□□ -1.16
THBS3-211ENST00000541990 TRBV24-1A0A075B6N3 115 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ETV2O00321 342 aaPredicted RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 HMGB3O15347 200 aaKnown RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 HERV-K104P61576 105 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 GRB2P62993 217 aaKnown RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 ARL6IP1Q15041 203 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ZNF787Q6DD87 383 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 OR10A7Q8NGE5 316 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 TMEM37Q8WXS4 190 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ARHGAP21Q5T5U3 1957 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 SPTAN1Q13813 2472 aaKnown RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 CEBPZOSA8MTT3 80 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 M0R135 149 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 TLX3O43711 291 aaPredicted RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 PATE4P0C8F1 98 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 DTYMKP23919 212 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 TAS2R30P59541 319 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ARG2P78540 354 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ARL16Q0P5N6 197 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 PMS2P11Q13670 270 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 RTL6Q6ICC9 239 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 GAPTQ8N292 157 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 FADS6Q8N9I5 356 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ABHD3Q8WU67 409 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 PP6455Q8WZ26 134 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 RBMXL1Q96E39 390 aaKnown RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 ZNF799Q96GE5 643 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ACTR3CQ9C0K3 210 aaPredicted RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 RBKSQ9H477 322 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ZNF552Q9H707 407 aaPredicted RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 SH2D2AQ9NP31 389 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ICE1Q9Y2F5 2266 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 C21orf140B9A014 251 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 HSPB6O14558 160 aa7.79□□□□□ -1.16
THBS3-211ENST00000541990 ZNF25P17030 456 aaPredicted RBP7.79□□□□□ -1.16
THBS3-211ENST00000541990 CD33P20138 364 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms