RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 HIST1H2BKO60814 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST1H2BJP06899 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST1H2BOP23527 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST1H2BBP33778 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 RND2P52198 227 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST1H2BDP58876 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST1H2BCP62807 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 C3AR1Q16581 482 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST2H2BEQ16778 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 DCAF12Q5T6F0 453 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 ZNF497Q6ZNH5 498 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 OR51H1Q8NH63 302 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST1H2BHQ93079 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 RBMXL1Q96E39 390 aaKnown RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 THOC3Q96J01 351 aaKnown RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST1H2BNQ99877 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HIST1H2BMQ99879 126 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 GGACTQ9BVM4 153 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 PKIBQ9C010 78 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 PRSS50Q9UI38 385 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 BOKQ9UMX3 212 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 CXorf65A6NEN9 183 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 HSPA12AO43301 675 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 TAGLN2P37802 199 aaKnown RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 THNSL2Q86YJ6 484 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 CMTM1Q8IZ96 169 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 FAM58AQ8N1B3 248 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 TMEM251Q8N6I4 163 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 TVP23CQ96ET8 276 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 SSX3Q99909 188 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 TCEAL7Q9BRU2 100 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 FOXJ2Q9P0K8 574 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 DOK5Q9P104 306 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 R4GN57 208 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 MT-CO3P00414 261 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 IGKV1D-33P01593 117 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 IGKV1-33P01594 117 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 ZNF806P0C7X5 589 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 ITGA3P26006 1051 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 CDX1P47902 265 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 ACSF3Q4G176 576 aaPredicted RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 OR10V1Q8NGI7 309 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 ABHD5Q8WTS1 349 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 TCEAL3Q969E4 200 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 TMPRSS5Q9H3S3 457 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 PLK3Q9H4B4 646 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 ZNF665Q9H7R5 613 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 MBNL3Q9NUK0 354 aaKnown RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 CISD1Q9NZ45 108 aaKnown RBP8.06□□□□□ -1.12
CNOT4-212ENST00000541284 CACNG5Q9UF02 275 aa8.06□□□□□ -1.12
CNOT4-212ENST00000541284 LNP1A1A4G5 178 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 FAM166BA8MTA8 275 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 DEGS1O15121 323 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 BRWD1-AS2P59051 145 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 UBE2KP61086 200 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 AKR1C8PQ5T2L2 129 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 RCC1LQ96I51 464 aaKnown RBP8.05□□□□□ -1.12
CNOT4-212ENST00000541284 RAB40CQ96S21 281 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 PARD6GQ9BYG4 376 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-212ENST00000541284 BCL2L14Q9BZR8 327 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 SIRT7Q9NRC8 400 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 OR5B21A6NL26 309 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 WRBO00258 174 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 IFNA17P01571 189 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 KIAA0141Q14154 515 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-212ENST00000541284 LRRC75BQ2VPJ9 315 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 FAM209BQ5JX69 171 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 GFI1BQ5VTD9 330 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 FAM53AQ6NSI3 398 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-212ENST00000541284 IGF2-ASQ6U949 168 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 OR10J5Q8NHC4 309 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 SNIP1Q8TAD8 396 aaKnown RBP8.05□□□□□ -1.12
CNOT4-212ENST00000541284 BCL2L2Q92843 193 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-212ENST00000541284 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
CNOT4-212ENST00000541284 STRADBQ9C0K7 418 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 MPC1Q9Y5U8 109 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 MED13Q9UHV7 2174 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 TRBV23-1A0A0A0MS06 115 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 BCL2P10415 239 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 ARR3P36575 388 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 RPS10P46783 165 aaKnown RBP8.05□□□□□ -1.12
CNOT4-212ENST00000541284 GNG3P63215 75 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 TLE4Q04727 773 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 TCTEX1D2Q8WW35 142 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 OPA3Q9H6K4 179 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 TREM2Q9NZC2 230 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 WIPI2Q9Y4P8 454 aa8.05□□□□□ -1.12
CNOT4-212ENST00000541284 ZNF292O60281 2723 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 KIAA2026Q5HYC2 2103 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 M0R296 226 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 SYNGR2O43760 224 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 DFFBO76075 338 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 WISP2O76076 250 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 SOD3P08294 240 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 IAPPP10997 89 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 CA6P23280 308 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 RPL23AP62750 156 aaKnown RBP8.04□□□□□ -1.12
CNOT4-212ENST00000541284 OR2T2Q6IF00 324 aa8.04□□□□□ -1.12
CNOT4-212ENST00000541284 OR1K1Q8NGR3 316 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms