RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 Q6ZTK2 550 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 OR4C13Q8NGP0 309 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 HDHD3Q9BSH5 251 aaPredicted RBP7.42□□□□□ -1.22
SNHG1-215ENST00000540904 PECRQ9BY49 303 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 NPFFR1Q9GZQ6 430 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 OR2S2Q9NQN1 319 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 ABRACLQ9P1F3 81 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 HSF4Q9ULV5 492 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 RNF114Q9Y508 228 aa7.42□□□□□ -1.22
SNHG1-215ENST00000540904 TIMM23O14925 209 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 SLC31A2O15432 143 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 TSPAN9O75954 239 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 CLEC2LP0C7M8 214 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 RAB6AP20340 208 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 PPP1CCP36873 323 aaKnown RBP7.41□□□□□ -1.22
SNHG1-215ENST00000540904 REG1BP48304 166 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 RAB7AP51149 207 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 SRSF4Q08170 494 aaKnown RBP7.41□□□□□ -1.22
SNHG1-215ENST00000540904 DIAPH2-AS1Q14236 149 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 GNMTQ14749 295 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 TMEM30BQ3MIR4 351 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 MOGAT2Q3SYC2 334 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 TIMM50Q3ZCQ8 353 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 SFXN4Q6P4A7 337 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 Q6ZPA2 131 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 ZNF554Q86TJ5 538 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 OR52L2PQ8NGH6 319 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 OR56B4Q8NH76 319 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 CAPSLQ8WWF8 208 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 WFDC12Q8WWY7 111 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 IL1F10Q8WWZ1 152 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 GALMQ96C23 342 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 RAB3CQ96E17 227 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 CMSS1Q9BQ75 279 aaKnown RBP7.41□□□□□ -1.22
SNHG1-215ENST00000540904 OCSTAMPQ9BR26 566 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 ATG5Q9H1Y0 275 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 RIMS4Q9H426 269 aaPredicted RBP7.41□□□□□ -1.22
SNHG1-215ENST00000540904 C16orf95Q9H693 158 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 C12orf4Q9NQ89 552 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 SIGLEC9Q9Y336 463 aa7.41□□□□□ -1.22
SNHG1-215ENST00000540904 A0A075B6Q4 140 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 A0A1W2PPI3 338 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 METTL21EPA6NDL7 271 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 HSD17B6O14756 317 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 AIREO43918 545 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 FAM106CPP0CH98 169 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 SNRPBP14678 240 aaKnown RBP7.4□□□□□ -1.22
SNHG1-215ENST00000540904 GNB3P16520 340 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 IL3RAP26951 378 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 TGFBR1P36897 503 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 ZNF134P52741 427 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 LSM3P62310 102 aaKnown RBP7.4□□□□□ -1.22
SNHG1-215ENST00000540904 MRPS15P82914 257 aaKnown RBP7.4□□□□□ -1.22
SNHG1-215ENST00000540904 HTD2P86397 168 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 HABP2Q14520 560 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-215ENST00000540904 HMGN3Q15651 99 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 MORN2Q502X0 79 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 FBLN7Q53RD9 439 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 CT45A1Q5HYN5 189 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 IDNKQ5T6J7 187 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 ZNF880Q6PDB4 577 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 SLC25A48Q6ZT89 311 aaKnown RBP7.4□□□□□ -1.22
SNHG1-215ENST00000540904 MOB1BQ7L9L4 216 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 OR8H3Q8N146 312 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 LINC00311Q8N616 119 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 DRAM1Q8N682 238 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 C8orf31Q8N9H6 132 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 OR10R2Q8NGX6 335 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 OR2T6Q8NHC8 308 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 CT45A3Q8NHU0 189 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 LGALS14Q8TCE9 139 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 PTX4Q96A99 478 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 YIPF6Q96EC8 236 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 RANBP3Q9H6Z4 567 aaPredicted RBP7.4□□□□□ -1.22
SNHG1-215ENST00000540904 JPT1Q9UK76 154 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 KCNK7Q9Y2U2 307 aa7.4□□□□□ -1.22
SNHG1-215ENST00000540904 TRBV6-6A0A0A6YYG2 114 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 IGHV3-72A0A0B4J1Y9 119 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 TRIM64CA6NLI5 447 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 RAB27BO00194 218 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 RGS11O94810 467 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 GAPDHP04406 335 aaKnown RBP7.39□□□□□ -1.23
SNHG1-215ENST00000540904 SNRNP70P08621 437 aaKnown RBP7.39□□□□□ -1.23
SNHG1-215ENST00000540904 CD3GP09693 182 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 HIST1H1DP16402 221 aaKnown RBP7.39□□□□□ -1.23
SNHG1-215ENST00000540904 KIR2DS4P43632 304 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 PROK1P58294 105 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 BLCAPP62952 87 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 HLA-DRB3P79483 266 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 ZNF816Q0VGE8 651 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-215ENST00000540904 HES1Q14469 280 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 Q3ZCU0 254 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 STEAP3Q658P3 488 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 MOB3BQ86TA1 216 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 LYG1Q8N1E2 194 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 ZNF439Q8NDP4 499 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 RTN4IP1Q8WWV3 396 aaPredicted RBP7.39□□□□□ -1.23
SNHG1-215ENST00000540904 ST6GALNAC6Q969X2 333 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 AKR1E2Q96JD6 320 aa7.39□□□□□ -1.23
SNHG1-215ENST00000540904 SLC25A33Q9BSK2 321 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms