RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 FBXO9Q9UK97 447 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-204ENST00000540846 OR2W1Q9Y3N9 320 aa10.4□□□□□ -0.74
SMAD3-204ENST00000540846 CSMD2Q7Z408 3487 aa10.4□□□□□ -0.75
SMAD3-204ENST00000540846 IGKV1D-17A0A075B6S4 117 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 TRAV39A0A0B4J263 110 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 MPC2O95563 127 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 PRDX2P32119 198 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 OPCMLQ14982 345 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 ZNF818PQ6ZRF7 136 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 SECTM1Q8WVN6 248 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 NRGNQ92686 78 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 MSI2Q96DH6 328 aaKnown RBP10.39□□□□□ -0.75
SMAD3-204ENST00000540846 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 METTL8Q9H825 291 aaKnown RBP10.39□□□□□ -0.75
SMAD3-204ENST00000540846 SAP30LQ9HAJ7 183 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 TAF9BQ9HBM6 251 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 RDH8Q9NYR8 311 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 OR1A1Q9P1Q5 309 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 KIF25Q9UIL4 384 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 TNFSF18Q9UNG2 199 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 ANKRD17O75179 2603 aaKnown RBP10.39□□□□□ -0.75
SMAD3-204ENST00000540846 MPPED1O15442 326 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 NDUFS7O75251 213 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 TFF1P04155 84 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 PSMB6P28072 239 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 S100A11P31949 105 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 CDKN1AP38936 164 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 SRPXP78539 464 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 IL15RAQ13261 267 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 ZNF345Q14585 488 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 TEX261Q6UWH6 196 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 ZNF546Q86UE3 836 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 GLYATL2Q8WU03 294 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 IL1F10Q8WWZ1 152 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 OR10C1Q96KK4 312 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 MFFQ9GZY8 342 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 SHARPINQ9H0F6 387 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 KCNIP1Q9NZI2 227 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 DNAJB11Q9UBS4 358 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 U3KQ87 197 aa10.39□□□□□ -0.75
SMAD3-204ENST00000540846 ITPR2Q14571 2701 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 C3orf85A0A1B0GTC6 90 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 OOEPA6NGQ2 149 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 MPTX1A8MV57 137 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 C12orf77C9JDV5 145 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 RP2O75695 350 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 LY6HO94772 140 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 HOXB5P09067 269 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 WNT2P09544 360 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 TNFRSF1AP19438 455 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 AESQ08117 197 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 SP6Q3SY56 376 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 LRRC37A5PQ49AS3 106 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 C6orf183Q5T699 404 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 GGNBP1Q5YKI7 109 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 TRAT1Q6PIZ9 186 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 TMUB2Q71RG4 321 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 LGI3Q8N145 548 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 BVESQ8NE79 360 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 ZNF680Q8NEM1 530 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 OR8H1Q8NGG4 311 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 THAP6Q8TBB0 222 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 C18orf12Q96KH6 178 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 TP53RKQ96S44 253 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 EGLN1Q9GZT9 426 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 MBD2Q9UBB5 411 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 PPP1R3CQ9UQK1 317 aa10.38□□□□□ -0.75
SMAD3-204ENST00000540846 KIAA2026Q5HYC2 2103 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 PDZD2O15018 2839 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 IGHV3OR15-7A0A075B7D8 119 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 RNF222A6NCQ9 220 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 PHF1O43189 567 aaPredicted RBP10.37□□□□□ -0.75
SMAD3-204ENST00000540846 OR2F2O95006 317 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 IFNA21P01568 189 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 HEXAP06865 529 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 LYL1P12980 280 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 GABRA2P47869 451 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 OR2F1Q13607 317 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 KRBOX4Q5JUW0 171 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 TBC1D26Q86UD7 250 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 CMTM1Q8IZ96 169 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 BOLLQ8N9W6 283 aaKnown RBP10.37□□□□□ -0.75
SMAD3-204ENST00000540846 OR10V1Q8NGI7 309 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 ANGPTL6Q8NI99 470 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 LHFPL5Q8TAF8 219 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 PPP1R35Q8TAP8 253 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 SNX22Q96L94 193 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 TOLLIPQ9H0E2 274 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 ARL6Q9H0F7 186 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 TMEM222Q9H0R3 208 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 RAB1BQ9H0U4 201 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 DNTTIP1Q9H147 329 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 CCL28Q9NRJ3 127 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 DSCAML1Q8TD84 2053 aa10.37□□□□□ -0.75
SMAD3-204ENST00000540846 A0A0D9SG52 128 aa10.36□□□□□ -0.75
SMAD3-204ENST00000540846 IGHV1-69-2A0A0G2JMI3 117 aa10.36□□□□□ -0.75
SMAD3-204ENST00000540846 H0Y980 276 aa10.36□□□□□ -0.75
SMAD3-204ENST00000540846 MGST3O14880 152 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms