RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 RAB13P51153 203 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 TIMM23BQ5SRD1 257 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 AKR1E2Q96JD6 320 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 GLS2Q9UI32 602 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 CEACAM8P31997 349 aaPredicted RBP11.6□□□□□ -0.55
RTN3-210ENST00000540798 SSTP61278 116 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 SLC35E4Q6ICL7 350 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 IL34Q6ZMJ4 242 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 ZNF826PQ6ZT77 177 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 RPRMLQ8N4K4 120 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 GINS3Q9BRX5 216 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 TRAPPC2LQ9UL33 140 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 WNT9BO14905 357 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 SLC25A6P12236 298 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 ID3Q02535 119 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 PAX5Q02548 391 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 ARL11Q969Q4 196 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 LRRC46Q96FV0 321 aa11.6□□□□□ -0.55
RTN3-210ENST00000540798 TRAV39A0A0B4J263 110 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 PIGBOS1A0A0B4J2F0 54 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 ADAM20O43506 726 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 PITX3O75364 302 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 GCH1P30793 250 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 NKX2-1P43699 371 aaPredicted RBP11.59□□□□□ -0.55
RTN3-210ENST00000540798 CEBPDP49716 269 aaPredicted RBP11.59□□□□□ -0.55
RTN3-210ENST00000540798 MSMPQ1L6U9 139 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 KRTCAP3Q53RY4 240 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 PRAMEF6Q5VXH4 476 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 IGHV3-64DA0A0J9YX35 117 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 TMEM30CPA0ZSE6 113 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 ZNF705EA8MWA4 302 aaPredicted RBP11.59□□□□□ -0.55
RTN3-210ENST00000540798 IFNL4K9M1U5 179 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 TNFSF12O43508 249 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 MMP9P14780 707 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 S100GP29377 79 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 FABP6P51161 128 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
RTN3-210ENST00000540798 FAM57AQ8TBR7 257 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 SFT2D1Q8WV19 159 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 FZR1Q9UM11 496 aa11.59□□□□□ -0.55
RTN3-210ENST00000540798 BSNQ9UPA5 3926 aa11.58□□□□□ -0.55
RTN3-210ENST00000540798 PROB1E7EW31 1015 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 CD200P41217 278 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 GNMTQ14749 295 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 C10orf91Q5T1B1 145 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 IL1F10Q8WWZ1 152 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 S100PBPQ96BU1 408 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 SFXN3Q9BWM7 321 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 SEBOXQ9HB31 216 aaPredicted RBP11.58□□□□□ -0.56
RTN3-210ENST00000540798 SNAPINO95295 136 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 SEC11BP0C7V7 166 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 LPAR6P43657 344 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 AKIRIN2Q53H80 203 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 BTNL8Q6UX41 500 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 NARS2Q96I59 477 aaKnown RBP11.58□□□□□ -0.56
RTN3-210ENST00000540798 SMIM3Q9BZL3 60 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 MSL2Q9HCI7 577 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 PARP11Q9NR21 331 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 DSPP15924 2871 aaKnown RBP11.58□□□□□ -0.56
RTN3-210ENST00000540798 LAMA5O15230 3695 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 GVINP1Q7Z2Y8 2422 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 OR3A1P47881 315 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 NKX6-1P78426 367 aaPredicted RBP11.58□□□□□ -0.56
RTN3-210ENST00000540798 EWSR1Q01844 656 aaKnown RBP eCLIP11.58□□□□□ -0.56
RTN3-210ENST00000540798 MZT1Q08AG7 82 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 PJVKQ0ZLH3 352 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 CXorf66Q5JRM2 361 aaPredicted RBP11.58□□□□□ -0.56
RTN3-210ENST00000540798 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 ODF3L1Q8IXM7 274 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 OR2C3Q8N628 320 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 BOLLQ8N9W6 283 aaKnown RBP11.58□□□□□ -0.56
RTN3-210ENST00000540798 COQ2Q96H96 371 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 LYRM2Q9NU23 88 aaPredicted RBP11.58□□□□□ -0.56
RTN3-210ENST00000540798 OR14J1Q9UGF5 321 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 RNF115Q9Y4L5 304 aa11.58□□□□□ -0.56
RTN3-210ENST00000540798 URB1O60287 2271 aaKnown RBP11.57□□□□□ -0.56
RTN3-210ENST00000540798 PRR14LQ5THK1 2151 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 TMEM218A2RU14 115 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 KIAA1324LA8MWY0 1029 aaPredicted RBP11.57□□□□□ -0.56
RTN3-210ENST00000540798 IGKV1-39P01597 117 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 IGKV1D-39P04432 117 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 SPP1P10451 314 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 NHLH2Q02577 135 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 ASCL5Q7RTU5 278 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 CBLN2Q8IUK8 224 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 PARP12Q9H0J9 701 aaKnown RBP11.57□□□□□ -0.56
RTN3-210ENST00000540798 A0A0G2JRQ6 117 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 IGHV3-13P01766 116 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 PSG2P11465 335 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 CFHR2P36980 270 aa11.57□□□□□ -0.56
RTN3-210ENST00000540798 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
RTN3-210ENST00000540798 LSM10Q969L4 123 aaKnown RBP11.57□□□□□ -0.56
RTN3-210ENST00000540798 BORCS7-ASMTA0A0B4J1R7 106 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 A0A1B0GU03 582 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 IGSF23A1L1A6 192 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 C12orf77C9JDV5 145 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 ABCD4O14678 606 aa11.56□□□□□ -0.56
RTN3-210ENST00000540798 GATCO43716 136 aaKnown RBP11.56□□□□□ -0.56
RTN3-210ENST00000540798 BLOC1S1P78537 153 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms