RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 C9orf152Q5JTZ5 239 aa12□□□□□ -0.49
INO80E-203ENST00000540562 DCAF10Q5QP82 559 aa12□□□□□ -0.49
INO80E-203ENST00000540562 PCSK4Q6UW60 755 aa12□□□□□ -0.49
INO80E-203ENST00000540562 STX12Q86Y82 276 aa12□□□□□ -0.49
INO80E-203ENST00000540562 RPRMQ9NS64 109 aa12□□□□□ -0.49
INO80E-203ENST00000540562 B4GALT7Q9UBV7 327 aa12□□□□□ -0.49
INO80E-203ENST00000540562 ATP23Q9Y6H3 246 aa12□□□□□ -0.49
INO80E-203ENST00000540562 LNP1A1A4G5 178 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 C5orf52A6NGY3 159 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 RAMP3O60896 148 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 CLDN1O95832 211 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 FABP1P07148 127 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 RNFT1Q5M7Z0 435 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 RIPPLY2Q5TAB7 128 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 ZNF561Q8N587 486 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 Q8WTZ3 238 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 SPIN2AQ99865 258 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 SPIN2BQ9BPZ2 258 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 PRDM14Q9GZV8 571 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 IFT22Q9H7X7 185 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 KLF2Q9Y5W3 355 aaPredicted RBP11.99□□□□□ -0.49
INO80E-203ENST00000540562 HEXAP06865 529 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 NMSQ5H8A3 153 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 WDR25Q64LD2 544 aaPredicted RBP11.99□□□□□ -0.49
INO80E-203ENST00000540562 POM121L2Q96KW2 1035 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 FAM173AQ9BQD7 235 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 DCTN5Q9BTE1 182 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 SLC25A31Q9H0C2 315 aa11.99□□□□□ -0.49
INO80E-203ENST00000540562 CEBPZOSA8MTT3 80 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 IGKV1-39P01597 117 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 IGKV1D-39P04432 117 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 G6PCP35575 357 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 MPLP40238 635 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 SSX9Q7RTT3 188 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 LRTM2Q8N967 370 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 WDYHV1Q96HA8 205 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 ARV1Q9H2C2 271 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 MSL2Q9HCI7 577 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 PSENENQ9NZ42 101 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 KALRNO60229 2985 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 TACC2O95359 2948 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 LY86O95711 162 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 OR2H2O95918 312 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 TRGC2P03986 189 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 AESQ08117 197 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 EDDM3AQ14507 147 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 ICAM4Q14773 271 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 WDR86Q86TI4 376 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 LYPD6BQ8NI32 183 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 GATAD1Q8WUU5 269 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 SLC25A22Q9H936 323 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 OBP2BQ9NPH6 170 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 CLN8Q9UBY8 286 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 OR2W1Q9Y3N9 320 aa11.98□□□□□ -0.49
INO80E-203ENST00000540562 KIR2DS1A0A191URI9 304 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 PITX3O75364 302 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 SCAF4O95104 1147 aaKnown RBP11.97□□□□□ -0.49
INO80E-203ENST00000540562 IL18BPO95998 194 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 IFNA5P01569 189 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 KIR2DS4P43632 304 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 FABP6P51161 128 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 KIR2DS1Q14954 304 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 OR1L1Q8NH94 360 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 SCGB1C1Q8TD33 95 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 RPUSD4Q96CM3 377 aaKnown RBP11.97□□□□□ -0.49
INO80E-203ENST00000540562 STRAPQ9Y3F4 350 aaKnown RBP11.97□□□□□ -0.49
INO80E-203ENST00000540562 Q6ZSR3 168 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 OR52L2PQ8NGH6 319 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 OR5P3Q8WZ94 311 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 NIPSNAP3BQ9BS92 247 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 GSN-AS1Q9NRJ2 163 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 TNFSF15O95150 251 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 SRP19P09132 144 aaKnown RBP11.97□□□□□ -0.49
INO80E-203ENST00000540562 EGR1P18146 543 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 UCP1P25874 307 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 PMELP40967 661 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 OR3A1P47881 315 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 ZNF787Q6DD87 383 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 ZNF295-AS1Q8N0V1 137 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 TMEM56Q96MV1 263 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 RNF122Q9H9V4 155 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 TMEM56-RWDD3S4R434 201 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 CSMD1Q96PZ7 3565 aa11.97□□□□□ -0.49
INO80E-203ENST00000540562 IGKV1-5P01602 117 aa11.96□□□□□ -0.49
INO80E-203ENST00000540562 UCP3P55916 312 aa11.96□□□□□ -0.49
INO80E-203ENST00000540562 GNG3P63215 75 aa11.96□□□□□ -0.49
INO80E-203ENST00000540562 EIF3IQ13347 325 aaKnown RBP11.96□□□□□ -0.49
INO80E-203ENST00000540562 PRAMEF6Q5VXH4 476 aa11.96□□□□□ -0.49
INO80E-203ENST00000540562 MRGPRDQ8TDS7 321 aa11.96□□□□□ -0.49
INO80E-203ENST00000540562 ZDHHC16Q969W1 377 aa11.96□□□□□ -0.49
INO80E-203ENST00000540562 SPSB4Q96A44 273 aa11.96□□□□□ -0.49
INO80E-203ENST00000540562 IL36GQ9NZH8 169 aa11.96□□□□□ -0.49
INO80E-203ENST00000540562 AGAP20933 346 aa11.96□□□□□ -0.5
INO80E-203ENST00000540562 GABRA2P47869 451 aa11.96□□□□□ -0.5
INO80E-203ENST00000540562 ID3Q02535 119 aa11.96□□□□□ -0.5
INO80E-203ENST00000540562 TRA2AQ13595 282 aaKnown RBP eCLIP11.96□□□□□ -0.5
INO80E-203ENST00000540562 COLCA1Q6ZS62 124 aa11.96□□□□□ -0.5
INO80E-203ENST00000540562 DEFB123Q8N688 67 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms