RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 MRGPRFQ96AM1 343 aa7.53□□□□□ -1.2
DDB1-217ENST00000540166 TXNIPQ9H3M7 391 aa7.53□□□□□ -1.2
DDB1-217ENST00000540166 ABCA4P78363 2273 aa7.52□□□□□ -1.2
DDB1-217ENST00000540166 ITGB1BP1O14713 200 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 HRASP01112 189 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 DAP3P51398 398 aaKnown RBP7.52□□□□□ -1.21
DDB1-217ENST00000540166 CLRN1P58418 232 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 ROM1Q03395 351 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 PLAURQ03405 335 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 IL24Q13007 206 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 LINC00114Q6XXX2 140 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 NUFIP2Q7Z417 695 aaKnown RBP7.52□□□□□ -1.21
DDB1-217ENST00000540166 H1FOOQ8IZA3 346 aaPredicted RBP7.52□□□□□ -1.21
DDB1-217ENST00000540166 AP1S3Q96PC3 154 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 HSPB9Q9BQS6 159 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 PLA2G2EQ9NZK7 142 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 KLRF1Q9NZS2 232 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 XIRP2A4UGR9 3374 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 PCDH15Q96QU1 1955 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 MDFIC2A0A1B0GVS7 189 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 DUXBA0A1W2PPF3 345 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 ZNF737O75373 536 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 CA11O75493 328 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 ZNF205O95201 554 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 SELEP16581 610 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 FMODQ06828 376 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 PCK2Q16822 640 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 MRGPRGQ86SM5 289 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 FBXL14Q8N1E6 418 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 OR5AU1Q8NGC0 362 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 OR52M1Q8NGK5 317 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 STARD4Q96DR4 205 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 TMEM242Q9NWH2 141 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 MED29Q9NX70 200 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 PITX3O75364 302 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 RBMXL2O75526 392 aaKnown RBP7.52□□□□□ -1.21
DDB1-217ENST00000540166 SERPINE2P07093 398 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 ASAH2BP0C7U1 165 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 IGFBP3P17936 291 aaPredicted RBP7.52□□□□□ -1.21
DDB1-217ENST00000540166 ZNF133P52736 654 aaPredicted RBP7.52□□□□□ -1.21
DDB1-217ENST00000540166 FOXL2P58012 376 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 HBG1P69891 147 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 HBG2P69892 147 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 FHL1Q13642 323 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 SGCBQ16585 318 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 C6orf201Q7Z4U5 140 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 TMEM252Q8N6L7 170 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 CLDND2Q8NHS1 167 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 APH1AQ96BI3 265 aa7.52□□□□□ -1.21
DDB1-217ENST00000540166 ERRFI1Q9UJM3 462 aaPredicted RBP7.52□□□□□ -1.21
DDB1-217ENST00000540166 LRRK1Q38SD2 2015 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 LOC102723971A0A1B0GUV8 181 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 CRYM-AS1A6NIL9 109 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 TRDCB7Z8K6 153 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 MT-ATP6P00846 226 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 RPS4XP62701 263 aaKnown RBP7.51□□□□□ -1.21
DDB1-217ENST00000540166 TGIF2LYQ8IUE0 185 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 PRR18Q8N4B5 295 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 TMEM170AQ8WVE7 144 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 ATP5SQ99766 215 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 SDF2L1Q9HCN8 221 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 BOKQ9UMX3 212 aaPredicted RBP7.51□□□□□ -1.21
DDB1-217ENST00000540166 IL33O95760 270 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 BRS3P32247 399 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 HTD2P86397 168 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 ZNF154Q13106 437 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 TMEM211Q6ICI0 200 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 ZNF321PQ8N8H1 164 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 PIGTQ969N2 578 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 BORCS7Q96B45 105 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 ANAPC16Q96DE5 110 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 SNRNP40Q96DI7 357 aaKnown RBP7.51□□□□□ -1.21
DDB1-217ENST00000540166 ANXA10Q9UJ72 324 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 TMEM14DPA8MWL7 114 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 F5H5K5 113 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 CRISP2P16562 243 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 MRPS11P82912 194 aaKnown RBP7.51□□□□□ -1.21
DDB1-217ENST00000540166 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.51□□□□□ -1.21
DDB1-217ENST00000540166 PLAC9Q5JTB6 97 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 PPP1R32Q7Z5V6 425 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 TCTEX1D1Q8N7M0 179 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 DEFB127Q9H1M4 99 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 SLC2A9Q9NRM0 540 aa7.51□□□□□ -1.21
DDB1-217ENST00000540166 POLR3KQ9Y2Y1 108 aaPredicted RBP7.51□□□□□ -1.21
DDB1-217ENST00000540166 LRRK2Q5S007 2527 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 VSTM2BA6NLU5 285 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 FAM166BA8MTA8 275 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 F6UZH7 168 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 HMGB3O15347 200 aaKnown RBP7.5□□□□□ -1.21
DDB1-217ENST00000540166 GUSBP08236 651 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 ZNF16P17020 682 aaPredicted RBP7.5□□□□□ -1.21
DDB1-217ENST00000540166 KITLGP21583 273 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 HINT1P49773 126 aaPredicted RBP7.5□□□□□ -1.21
DDB1-217ENST00000540166 BIDP55957 195 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 TAS2R30P59541 319 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 PAFAH1B2P68402 229 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 EGR4Q05215 589 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 MRPL49Q13405 166 aaKnown RBP7.5□□□□□ -1.21
DDB1-217ENST00000540166 VHLLQ6RSH7 139 aa7.5□□□□□ -1.21
DDB1-217ENST00000540166 MRPL52Q86TS9 123 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms