RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 NEDD4LQ96PU5 975 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 UQCC2Q9BRT2 126 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 DCLRE1BQ9H816 532 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 CNOT2Q9NZN8 540 aaKnown RBP12.04□□□□□ -0.48
UBE3B-211ENST00000539843 CLEC2DQ9UHP7 191 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 ZNF107Q9UII5 783 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-211ENST00000539843 JPT1Q9UK76 154 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 LRRC42Q9Y546 428 aa12.04□□□□□ -0.48
UBE3B-211ENST00000539843 TRAV8-7A0A075B6U6 113 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 A0A1W2PPK0 400 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 LANCL1O43813 399 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 UBBP0CG47 229 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 KIR2DS1Q14954 304 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 LCNL1Q6ZST4 164 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 C18orf65Q6ZTR6 163 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 C8orf59Q8N0T1 100 aaPredicted RBP12.03□□□□□ -0.48
UBE3B-211ENST00000539843 TMEM104Q8NE00 496 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 TFAP2CQ92754 450 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 RAX2Q96IS3 184 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 PGLYRP3Q96LB9 341 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 ZNF251Q9BRH9 671 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 ABHD14AQ9BUJ0 271 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 VCXQ9H320 206 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 BANF2Q9H503 90 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 TAF9BQ9HBM6 251 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 ABRACLQ9P1F3 81 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 ZNF580Q9UK33 172 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 ERGIC3Q9Y282 383 aa12.03□□□□□ -0.48
UBE3B-211ENST00000539843 TRBV5-7A0A0A0MS05 114 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 UBE2QL1A1L167 161 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 MAGEA13PA6NCF6 341 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 PDCD6O75340 191 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 LALBAP00709 142 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 CD1AP06126 327 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 CELP19835 753 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 WNT4P56705 351 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 NKAPLQ5M9Q1 402 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 FAM71E2Q8N5Q1 922 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 OR2AK2Q8NG84 335 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 OR1L1Q8NH94 360 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 C4orf3Q8WVX3 66 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 GGHQ92820 318 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 GALMQ96C23 342 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 DERL3Q96Q80 235 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 STEAP1Q9UHE8 339 aa12.02□□□□□ -0.49
UBE3B-211ENST00000539843 SLC31A2O15432 143 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 SC5DO75845 299 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 IGHG4P01861 327 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 IGF1P05019 195 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 NHLRC4P0CG21 123 aaPredicted RBP12.01□□□□□ -0.49
UBE3B-211ENST00000539843 MYF6P23409 242 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 RPS11P62280 158 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBE3B-211ENST00000539843 LSAMPQ13449 338 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 CT45A1Q5HYN5 189 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 GLT8D1Q68CQ7 371 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 GAPTQ8N292 157 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 RNF152Q8N8N0 203 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 ZNF439Q8NDP4 499 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 CT45A3Q8NHU0 189 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 Q96M66 194 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 KCTD7Q96MP8 289 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 WWC2-AS2Q96NR7 200 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 DUX3Q96PT4 197 aa12.01□□□□□ -0.49
UBE3B-211ENST00000539843 LINC01548A6NM66 108 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 ZNF736B4DX44 427 aaPredicted RBP12□□□□□ -0.49
UBE3B-211ENST00000539843 SEC14L6B5MCN3 397 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 SLC2A2P11168 524 aaPredicted RBP12□□□□□ -0.49
UBE3B-211ENST00000539843 RCC1P18754 421 aaPredicted RBP12□□□□□ -0.49
UBE3B-211ENST00000539843 HTD2P86397 168 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 DEFB136Q30KP8 78 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 MORN2Q502X0 79 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 C11orf87Q6NUJ2 197 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 AHSA2Q719I0 299 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 MS4A15Q8N5U1 240 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 FAM46BQ96A09 425 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 CHMP1AQ9HD42 196 aaPredicted RBP12□□□□□ -0.49
UBE3B-211ENST00000539843 PLSCR3Q9NRY6 295 aa12□□□□□ -0.49
UBE3B-211ENST00000539843 MBNL3Q9NUK0 354 aaKnown RBP12□□□□□ -0.49
UBE3B-211ENST00000539843 NBR2O15453 112 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 YPEL1O60688 119 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 OR8U8P0C7N1 319 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 ZNF134P52741 427 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 F2RL1P55085 397 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 ACTBP60709 375 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 BPIFB6Q8NFQ5 453 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 YPEL2Q96QA6 119 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 HSPB9Q9BQS6 159 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 MND1Q9BWT6 205 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 TMEM59Q9BXS4 323 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 PARP11Q9NR21 331 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 VSIG4Q9Y279 399 aa11.99□□□□□ -0.49
UBE3B-211ENST00000539843 HLA-DRB1P01911 266 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 PSMB8P28062 276 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 PPP1CCP36873 323 aaKnown RBP11.98□□□□□ -0.49
UBE3B-211ENST00000539843 ECI1P42126 302 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 RANBP1P43487 201 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 INSL3P51460 131 aa11.98□□□□□ -0.49
UBE3B-211ENST00000539843 LUMP51884 338 aaPredicted RBP11.98□□□□□ -0.49
UBE3B-211ENST00000539843 ADARB1P78563 741 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms