RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 IGHV3OR16-9A0A0B4J2B5 98 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 A0A0U1RQV1 116 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 A0A1W2PQ67 120 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 DHRS7CA6NNS2 312 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 EVPLLA8MZ36 301 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TRIM49D1C9J1S8 452 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 J3QT63 122 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 SLC31A2O15432 143 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 CRLF1O75462 422 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 CA11O75493 328 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 OR7C1O76099 320 aaPredicted RBP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 S1PR2O95136 353 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 C6orf47O95873 294 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 MOSP00540 346 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 IGKV1D-16P01601 117 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 IL3P08700 152 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 MMP7P09237 267 aaPredicted RBP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 GIPP09681 153 aaPredicted RBP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 C1GALT1C1LP0DN25 315 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 OR5H8P0DN80 308 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TDGF1P13385 188 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 ADRB3P13945 408 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 PSMB1P20618 241 aaKnown RBP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 IGHV1-2P23083 117 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 SLC6A1P30531 599 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 OR1E2P47887 323 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TCTAP57738 103 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 MTPNP58546 118 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 NANOS2P60321 138 aaKnown RBP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 RAP1BP61224 184 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 GNG3P63215 75 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 ZNF45Q02386 682 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 PRDX1Q06830 199 aaKnown RBP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 IHHQ14623 411 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 LTB4RQ15722 352 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 ACSBG2Q5FVE4 666 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 CLEC12AQ5QGZ9 265 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 ANKRD22Q5VYY1 191 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TMEM215Q68D42 235 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 UGT2A3Q6UWM9 527 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 DNM1P46Q6ZS02 220 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 GALNT10Q86SR1 603 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TMEM86BQ8N661 226 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 OR4P4Q8NGL7 312 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 OR1L8Q8NGR8 309 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 NEIL3Q8TAT5 605 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TNFAIP8L1Q8WVP5 186 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 CYGBQ8WWM9 190 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 RXFP2Q8WXD0 754 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TAF15Q92804 592 aaKnown RBP eCLIP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 MARC2Q969Z3 335 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TAMM41Q96BW9 452 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 C12orf43Q96C57 262 aaKnown RBP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 LRRC58Q96CX6 371 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 TSC22D3Q99576 134 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 KIFC1Q9BW19 673 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 POMKQ9H5K3 350 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 PANK3Q9H999 370 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 MIEF1Q9NQG6 463 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 ZNF71Q9NQZ8 489 aaPredicted RBP2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 SPANXA1Q9NS26 97 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 DOK5Q9P104 306 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 ZNF225Q9UK10 706 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 DKKL1Q9UK85 242 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 HSPB11Q9Y547 144 aa2.95□□□□□ -1.94
AC055720.1-201ENST00000539552 CACNA1FO60840 1977 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 SCN10AQ9Y5Y9 1956 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 KIF20BQ96Q89 1820 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 SPEF2Q9C093 1822 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 GPR31O00270 319 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 BHLHE40O14503 412 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 AGPAT2O15120 278 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 REM1O75628 298 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 STK16O75716 305 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 EIF4EP06730 217 aaKnown RBP2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 CRYGDP07320 174 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 ERGP11308 486 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 IGLL1P15814 213 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 VDAC1P21796 283 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 MARK3P27448 753 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 KRTAP10-5P60370 271 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 CDC42P60953 191 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 PSG4Q00888 419 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 ZNF763Q0D2J5 394 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 ZNF266Q14584 549 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 ACOT6Q3I5F7 207 aaPredicted RBP2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 TTC32Q5I0X7 151 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 GFI1BQ5VTD9 330 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 STEAP4Q687X5 459 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 OR10K2Q6IF99 312 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 OAFQ86UD1 273 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 C1orf158Q8N1D5 194 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 SMIM20Q8N5G0 67 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 OR51S1Q8NGJ8 323 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 OR10G9Q8NGN4 311 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 OR10J6PQ8NGY7 276 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 RNASE11Q8TAA1 199 aaKnown RBP2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 BLNKQ8WV28 456 aa2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 SRSF12Q8WXF0 261 aaKnown RBP2.94□□□□□ -1.94
AC055720.1-201ENST00000539552 TMBIM1Q969X1 311 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms