RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 UBALD1Q8TB05 177 aa10.61□□□□□ -0.71
CCDC42-202ENST00000539522 MRGPRDQ8TDS7 321 aa10.61□□□□□ -0.71
CCDC42-202ENST00000539522 NEK7Q8TDX7 302 aa10.61□□□□□ -0.71
CCDC42-202ENST00000539522 CCDC107Q8WV48 283 aa10.61□□□□□ -0.71
CCDC42-202ENST00000539522 PCGF1Q9BSM1 259 aa10.61□□□□□ -0.71
CCDC42-202ENST00000539522 DPAGT1Q9H3H5 408 aa10.61□□□□□ -0.71
CCDC42-202ENST00000539522 MBNL3Q9NUK0 354 aaKnown RBP10.61□□□□□ -0.71
CCDC42-202ENST00000539522 ETAA1Q9NY74 926 aa10.61□□□□□ -0.71
CCDC42-202ENST00000539522 COPZ2Q9P299 210 aa10.61□□□□□ -0.71
CCDC42-202ENST00000539522 UBE2J1Q9Y385 318 aaPredicted RBP10.61□□□□□ -0.71
CCDC42-202ENST00000539522 SETD2Q9BYW2 2564 aaPredicted RBP10.6□□□□□ -0.71
CCDC42-202ENST00000539522 TRAV40A0A0B4J280 105 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 hADV38S2A0JD32 116 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 TMEM30CPA0ZSE6 113 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 FUOMA2VDF0 154 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 CRLF1O75462 422 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 RAB3DO95716 219 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 CD3DP04234 171 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 IGHV1-8P0DP01 117 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 PRTN3P24158 256 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 HLA-DMAP28067 261 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 PLA1AQ53H76 456 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 ACTBL2Q562R1 376 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 PRAMEF5Q5TYX0 476 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 PLET1Q6UQ28 207 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 ZNF782Q6ZMW2 699 aaPredicted RBP10.6□□□□□ -0.71
CCDC42-202ENST00000539522 PDZD9Q8IXQ8 264 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 GVQW1Q8N7I0 195 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 ZNF714Q96N38 554 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 OCEL1Q9H607 264 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 LPAR3Q9UBY5 353 aa10.6□□□□□ -0.71
CCDC42-202ENST00000539522 IGKV1D-8A0A087WSZ0 117 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 TRBV6-6A0A0A6YYG2 114 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 DISC1C4P0D8 188 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 C12orf77C9JDV5 145 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 IFNA6P05013 189 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 SPNP16150 400 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 OR3A3P47888 321 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 TAS2R46P59540 309 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 RNASE10Q5GAN6 216 aaKnown RBP10.59□□□□□ -0.71
CCDC42-202ENST00000539522 METTL11BQ5VVY1 283 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 BRD3OSQ6XYD6 125 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 BEST4Q8NFU0 473 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 C17orf50Q8WW18 174 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 LHX4Q969G2 390 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 KIRREL1Q96J84 757 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 ZNF48Q96MX3 618 aaPredicted RBP10.59□□□□□ -0.71
CCDC42-202ENST00000539522 C12orf4Q9NQ89 552 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 MCUBQ9NWR8 336 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 TAS2R3Q9NYW6 316 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 CALYQ9NYX4 217 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 ZNRD1Q9P1U0 126 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 ZNF69Q9UC07 566 aa10.59□□□□□ -0.71
CCDC42-202ENST00000539522 TRGV10A0A0A0MS01 117 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 KBTBD11-OT1A0A1B0GTJ5 212 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 FAM172BPA6NC97 362 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF729A6NN14 1252 aaPredicted RBP10.58□□□□□ -0.72
CCDC42-202ENST00000539522 RBP4P02753 201 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 TCRBP04435 133 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 FCER2P06734 321 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 FCGR3AP08637 254 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 GLP1RP43220 463 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 LOXL3P58215 753 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 CHRFAM7AQ494W8 412 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 OR52W1Q6IF63 320 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 HEPN1Q6WQI6 88 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 Q6ZS49 121 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 OR5AP2Q8NGF4 316 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 OR4C16Q8NGL9 310 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 OR1L1Q8NH94 360 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 RFESDQ8TAC1 157 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 METTL8Q9H825 291 aaKnown RBP10.58□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF286AQ9HBT8 521 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 CHMP1AQ9HD42 196 aaPredicted RBP10.58□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF230Q9UIE0 474 aaPredicted RBP10.58□□□□□ -0.72
CCDC42-202ENST00000539522 SCP2D1Q9UJQ7 156 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 NUBP2Q9Y5Y2 271 aa10.58□□□□□ -0.72
CCDC42-202ENST00000539522 A0A087X0M5 115 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 IGKV1-6A0A0C4DH72 117 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 MDFIC2A0A1B0GVS7 189 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 A0A1B0GX30 115 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 A0A1W2PRD5 423 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 A0A1W2PRF3 423 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 A0A1W2PRM7 423 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 ODF3BA8MYP8 253 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 M0QYG6 137 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 PMP2P02689 132 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 ZNF735P0CB33 412 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 PAX6P26367 422 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 BTCP35070 178 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 HMGN3Q15651 99 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 VAX1Q5SQQ9 334 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 TMEM17Q86X19 198 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 OR5H2Q8NGV7 314 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 C22orf15Q8WYQ4 148 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 SNAPC3Q92966 411 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 LEAP2Q969E1 77 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 CREB3L1Q96BA8 519 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 PRRT1Q99946 306 aa10.57□□□□□ -0.72
CCDC42-202ENST00000539522 MARVELD1Q9BSK0 173 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms