RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 H0YIG0 161 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 K7ERU9 68 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 SIRPB1O00241 398 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 HMGB3O15347 200 aaKnown RBP5.73□□□□□ -1.49
USP28-207ENST00000538475 TLX3O43711 291 aaPredicted RBP5.73□□□□□ -1.49
USP28-207ENST00000538475 GYPAP02724 150 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 CLPSP04118 112 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 OR5G3P0C626 314 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 SELEP16581 610 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 ZNF17P17021 662 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 IL3RAP26951 378 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 DRD3P35462 400 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 METAP1P53582 386 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 SUMO1P63165 101 aaKnown RBP5.73□□□□□ -1.49
USP28-207ENST00000538475 FMODQ06828 376 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 CNN3Q15417 329 aaKnown RBP5.73□□□□□ -1.49
USP28-207ENST00000538475 OR10J3Q5JRS4 329 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 VWA1Q6PCB0 445 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 LHFPL2Q6ZUX7 228 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 TCF24Q7RTU0 167 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 LINC00346Q8IVM7 164 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 SYT8Q8NBV8 401 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 MRPL30Q8TCC3 161 aaKnown RBP5.73□□□□□ -1.49
USP28-207ENST00000538475 RNASE8Q8TDE3 154 aaKnown RBP5.73□□□□□ -1.49
USP28-207ENST00000538475 LHX4Q969G2 390 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 TOMM40LQ969M1 308 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 CHRNA10Q9GZZ6 450 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 PARLQ9H300 379 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 ALKBH4Q9NXW9 302 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 ST3GAL6Q9Y274 331 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 MRPS2Q9Y399 296 aaKnown RBP5.73□□□□□ -1.49
USP28-207ENST00000538475 WNT6Q9Y6F9 365 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 X6R8D5 127 aa5.73□□□□□ -1.49
USP28-207ENST00000538475 TNRC6BQ9UPQ9 1833 aaKnown RBP5.72□□□□□ -1.49
USP28-207ENST00000538475 IGKV1D-8A0A087WSZ0 117 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 IGKV1-9A0A0C4DH69 117 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 KIR2DS5A0A0G2JLQ3 304 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 IGHV1-69-2A0A0G2JMI3 117 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 A0A0G2JNG1 304 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 A0A0U1RQK1 487 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 KIR2DS1A0A191URI9 304 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 ZNF320A2RRD8 509 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 ANKUB1A6NFN9 424 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 OTOL1A6NHN0 477 aaPredicted RBP5.72□□□□□ -1.49
USP28-207ENST00000538475 A6NNC1 897 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 PRRT4C9JH25 899 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 NPIPA2E9PIF3 369 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 KIR2DS3K7RE56 304 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 CCL25O15444 150 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 CHST1O43916 411 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 SSSCA1O60232 199 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 PDCD6O75340 191 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 TOX4O94842 621 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 MPZL1O95297 269 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 PPYP01298 95 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 IGHG1P01857 330 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 IGLC2P0DOY2 106 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 IGLC3P0DOY3 106 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 CRISP2P16562 243 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 DRD1P21728 446 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 TUBG1P23258 451 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 TNFSF4P23510 183 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 IL12BP29460 328 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 KIR2DS4P43632 304 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 HNRNPA3P51991 378 aaKnown RBP5.72□□□□□ -1.49
USP28-207ENST00000538475 PAX9P55771 341 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 ERVS71-1P61550 626 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 GNB2P62879 340 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 GPM6BQ13491 265 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 KIR2DS5Q14953 304 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 KIR2DS1Q14954 304 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 PDGFRLQ15198 375 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 SHBQ15464 509 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 TESK1Q15569 626 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 CST6Q15828 149 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 TCTN1Q2MV58 587 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 SP6Q3SY56 376 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 SLC25A53Q5H9E4 307 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 WDR73Q6P4I2 378 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 SLC25A47Q6Q0C1 308 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 CRIP3Q6Q6R5 217 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 COMMD2Q86X83 199 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 ZNF761Q86XN6 746 aaPredicted RBP5.72□□□□□ -1.49
USP28-207ENST00000538475 ODF3L1Q8IXM7 274 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 ZNF525Q8N782 197 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 SIGLECL1Q8N7X8 197 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 Q8NFD4 153 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 PLPPR1Q8TBJ4 325 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 RAB1CQ92928 201 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 RELTQ969Z4 430 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 ADIPOR1Q96A54 375 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 C20orf173Q96LM9 149 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 WDR61Q9GZS3 305 aaKnown RBP5.72□□□□□ -1.49
USP28-207ENST00000538475 KCNIP2Q9NS61 270 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 TMEM74BQ9NUR3 256 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 OBP2AQ9NY56 170 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 ELOVL5Q9NYP7 299 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 TBC1D29Q9UFV1 150 aa5.72□□□□□ -1.49
USP28-207ENST00000538475 NXT1Q9UKK6 140 aaKnown RBP5.72□□□□□ -1.49
USP28-207ENST00000538475 TBL2Q9Y4P3 447 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms