RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 DUSP1P28562 367 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 PSG7Q13046 419 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 PMS2P11Q13670 270 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 SAMD5Q5TGI4 173 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF573Q86YE8 665 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 RPRMLQ8N4K4 120 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 FAM24BQ8N5W8 94 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 LYPD6BQ8NI32 183 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 BCL2L14Q9BZR8 327 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 PKIBQ9C010 78 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF286AQ9HBT8 521 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 WFDC1Q9HC57 220 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 C1orf123Q9NWV4 160 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 C14orf166Q9Y224 244 aaKnown RBP9.11□□□□□ -0.95
CLIP1-210ENST00000538120 FAM215AQ9Y5M1 114 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 TRBV23-1A0A0A0MS06 115 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 A0A1W2PPE2 198 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 NAPSAO96009 420 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 SNCAP37840 140 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 MPV17P39210 176 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 ECI1P42126 302 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 CAMLGP49069 296 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 OR2B8PP59922 312 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 EIF5AP63241 154 aaKnown RBP9.11□□□□□ -0.95
CLIP1-210ENST00000538120 MPV17LQ2QL34 196 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 TRAT1Q6PIZ9 186 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 OR1J1Q8NGS3 322 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 SH3BGRL3Q9H299 93 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 SLC35D1Q9NTN3 355 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 PROCRQ9UNN8 238 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 MEMO1Q9Y316 297 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 RFNGQ9Y644 331 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 KPTNQ9Y664 436 aa9.11□□□□□ -0.95
CLIP1-210ENST00000538120 IQCF6A8MYZ5 107 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 JTBO76095 146 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 DIRAS3O95661 229 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 SMIM6P0DI80 62 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 NQO2P16083 231 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 EIF2S3P41091 472 aaKnown RBP9.1□□□□□ -0.95
CLIP1-210ENST00000538120 GUK1Q16774 197 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 ADAM5Q6NVV9 412 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 Q6ZS49 121 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 C17orf78Q8N4C9 275 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 EIF5A2Q9GZV4 153 aaKnown RBP9.1□□□□□ -0.95
CLIP1-210ENST00000538120 J3QT63 122 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 IGLV1-44P01699 117 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 MBPP02686 304 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-210ENST00000538120 MT-ND4LP03901 98 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 OR8U8P0C7N1 319 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 PAX6P26367 422 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 ASCL1P50553 236 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF561Q8N587 486 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 KLF14Q8TD94 323 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-210ENST00000538120 TOMM40LQ969M1 308 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF251Q9BRH9 671 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 SEBOXQ9HB31 216 aaPredicted RBP9.1□□□□□ -0.95
CLIP1-210ENST00000538120 Q9N2K0 584 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 MIOXQ9UGB7 285 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 TUBD1Q9UJT1 453 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 FBXO7Q9Y3I1 522 aa9.1□□□□□ -0.95
CLIP1-210ENST00000538120 TRAV24A0A0B4J272 114 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 CRYM-AS1A6NIL9 109 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 H0YL77 283 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 GAPDHP04406 335 aaKnown RBP9.09□□□□□ -0.95
CLIP1-210ENST00000538120 CECR9P0C854 216 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 SRSF7Q16629 238 aaKnown RBP eCLIP9.09□□□□□ -0.95
CLIP1-210ENST00000538120 BHLHA15Q7RTS1 189 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-210ENST00000538120 MOGAT3Q86VF5 341 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 SGPP2Q8IWX5 399 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 FAM58AQ8N1B3 248 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 SUMF2Q8NBJ7 301 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 UBAC2Q8NBM4 344 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 EDARADDQ8WWZ3 215 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 RTL8AQ9BWD3 113 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 IGHV1-18A0A0C4DH31 117 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 LRP5LA4QPB2 252 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 S100A8P05109 93 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF728P0DKX0 622 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 RAB5AP20339 215 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 ERVK11-1P61568 191 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 IL13RA2Q14627 380 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 P2RY6Q15077 328 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 RNF212Q495C1 297 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 Q6P435 159 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 ZNF474Q6S9Z5 364 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-210ENST00000538120 LYZL2Q7Z4W2 148 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 LINC00596Q86U02 117 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 SCCPDHQ8NBX0 429 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 PLK3Q9H4B4 646 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 ZDHHC8Q9ULC8 765 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 WASF3Q9UPY6 502 aa9.09□□□□□ -0.95
CLIP1-210ENST00000538120 RCL1Q9Y2P8 373 aaKnown RBP9.09□□□□□ -0.95
CLIP1-210ENST00000538120 CACNA1GO43497 2377 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 OR5H1A6NKK0 313 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 UMAD1C9J7I0 102 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 HSPB6O14558 160 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 IGHV2-5P01817 119 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 CRYABP02511 175 aaKnown RBP9.08□□□□□ -0.96
CLIP1-210ENST00000538120 OR5AC1P0C628 307 aa9.08□□□□□ -0.96
CLIP1-210ENST00000538120 DANCRP0C864 163 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms