RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 HMGCLL1Q8TB92 370 aa5□□□□□ -1.61
CSMD1-215ENST00000537824 ZNF414Q96IQ9 312 aa5□□□□□ -1.61
CSMD1-215ENST00000537824 KLK13Q9UKR3 277 aa5□□□□□ -1.61
CSMD1-215ENST00000537824 PCOLCE2Q9UKZ9 415 aa5□□□□□ -1.61
CSMD1-215ENST00000537824 CTLA4P16410 223 aa5□□□□□ -1.61
CSMD1-215ENST00000537824 FMODQ06828 376 aa5□□□□□ -1.61
CSMD1-215ENST00000537824 LSM10Q969L4 123 aaKnown RBP5□□□□□ -1.61
CSMD1-215ENST00000537824 PLPPR2Q96GM1 343 aa5□□□□□ -1.61
CSMD1-215ENST00000537824 KCNE3Q9Y6H6 103 aa5□□□□□ -1.61
CSMD1-215ENST00000537824 TRAV8-7A0A075B6U6 113 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 IGHV3-15A0A0B4J1V0 119 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 RAMP1O60894 148 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 COL8A1P27658 744 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 CEACAM6P40199 344 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 INSM1Q01101 510 aaPredicted RBP4.99□□□□□ -1.61
CSMD1-215ENST00000537824 RELBQ01201 579 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ZNF117Q03924 483 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 SPATA46Q5T0L3 261 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 EGLN1Q9GZT9 426 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 JKAMPQ9P055 326 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 PSG11Q9UQ72 335 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 DPRXA6NFQ7 191 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 UBE2CO00762 179 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ALOX12BO75342 701 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 HBZP02008 142 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ORM2P19652 201 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ACP1P24666 158 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 PPICP45877 212 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 RAE1P78406 368 aaKnown RBP4.99□□□□□ -1.61
CSMD1-215ENST00000537824 EIF3IQ13347 325 aaKnown RBP4.99□□□□□ -1.61
CSMD1-215ENST00000537824 METRNLQ641Q3 311 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 BEND2Q8NDZ0 799 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 SEBOXQ9HB31 216 aaPredicted RBP4.99□□□□□ -1.61
CSMD1-215ENST00000537824 CARHSP1Q9Y2V2 147 aaKnown RBP4.99□□□□□ -1.61
CSMD1-215ENST00000537824 LRP5O75197 1615 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 A0A0B4J2E0 115 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 A0A1B0GX12 115 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 SYNGR2O43760 224 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 MT-ND6P03923 174 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 FUT6P51993 359 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 IGFBP7Q16270 282 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 RABEPKQ7Z6M1 372 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 HS3ST2Q9Y278 367 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 IGKV6D-21A0A0A0MT36 114 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ZNF716A6NP11 495 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 TSPAN2O60636 221 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ST6GAL1P15907 406 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 H2BFSP57053 126 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ADIPOQQ15848 244 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 TMEM177Q53S58 311 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 DEFB108BQ8NET1 73 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 OR2T8A6NH00 312 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 DEFB108AA8MXU0 73 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 GDF9O60383 454 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ZNF205O95201 554 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ABHD14AQ9BUJ0 271 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ANKRD10Q9NXR5 420 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 COA4Q9NYJ1 87 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ANKRD55Q3KP44 614 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 HES3Q5TGS1 186 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 GFI1BQ5VTD9 330 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 CST9Q5W186 159 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ZNF770Q6IQ21 691 aaPredicted RBP4.99□□□□□ -1.61
CSMD1-215ENST00000537824 HLA-DQA1P01909 254 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 HOXC13P31276 330 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 METAP1P53582 386 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 PSG5Q15238 335 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 HDHD3Q9BSH5 251 aaPredicted RBP4.99□□□□□ -1.61
CSMD1-215ENST00000537824 POLDIP2Q9Y2S7 368 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ABCA12Q86UK0 2595 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 TRAV39A0A0B4J263 110 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 HSPB1P04792 205 aaKnown RBP4.99□□□□□ -1.61
CSMD1-215ENST00000537824 OPRK1P41145 380 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 GCSAMLQ5JQS6 135 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 GAPTQ8N292 157 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 TEX29Q8N6K0 151 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 JMJD1CQ15652 2540 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 A0A1W2PRS3 328 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 PPP2CBP62714 309 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 ACVR1Q04771 509 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 PRNTQ86SH4 94 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 TPTE2P1Q5T6R2 138 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 FAM216AQ8WUB2 273 aa4.99□□□□□ -1.61
CSMD1-215ENST00000537824 A0A1B0GU03 582 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 IL4P05112 153 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 SFTPCP11686 197 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 JOSD1Q15040 202 aaPredicted RBP4.98□□□□□ -1.61
CSMD1-215ENST00000537824 OR10AC1Q8NH08 325 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 GTSF1LQ9H1H1 148 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 LAMTOR2Q9Y2Q5 125 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 EFNB1P98172 346 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 SLC25A30Q5SVS4 291 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 NCOR1P1Q9H4R4 102 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 IGHV3-20A0A0C4DH32 117 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 TBX6O95947 436 aaPredicted RBP4.98□□□□□ -1.61
CSMD1-215ENST00000537824 FAM157BP0CG42 384 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 RPS23P62266 143 aaKnown RBP4.98□□□□□ -1.61
CSMD1-215ENST00000537824 ZFAND6Q6FIF0 208 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 TMEM56Q96MV1 263 aa4.98□□□□□ -1.61
CSMD1-215ENST00000537824 CLN8Q9UBY8 286 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms