RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 PNMA8CA0A1B0GUJ8 204 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 IRGMA1A4Y4 181 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 UBE2QL1A1L167 161 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 TXNL1O43396 289 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 LANCL1O43813 399 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 RRP9O43818 475 aaKnown RBP6.6□□□□□ -1.35
USP28-203ENST00000537490 MAS1P04201 325 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 IGF1P05019 195 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 SLC2A2P11168 524 aaPredicted RBP6.6□□□□□ -1.35
USP28-203ENST00000537490 FSTP19883 344 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 VDAC1P21796 283 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 MYF6P23409 242 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 PSMB8P28062 276 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 SOX6P35712 828 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 ECI1P42126 302 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 GP2P55259 537 aaKnown RBP6.6□□□□□ -1.35
USP28-203ENST00000537490 DCTN2Q13561 401 aaKnown RBP6.6□□□□□ -1.35
USP28-203ENST00000537490 KIAA0141Q14154 515 aaPredicted RBP6.6□□□□□ -1.35
USP28-203ENST00000537490 DOC2BQ14184 412 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 GNMTQ14749 295 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 MORN2Q502X0 79 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 YIF1BQ5BJH7 314 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 C6orf183Q5T699 404 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 C9orf66Q5T8R8 295 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 STEAP3Q658P3 488 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 AWAT2Q6E213 333 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 OR5M8Q8NGP6 311 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 MRPS24Q96EL2 167 aaKnown RBP6.6□□□□□ -1.35
USP28-203ENST00000537490 RDH12Q96NR8 316 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 OR14A2Q96R54 314 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 SELENOIQ9C0D9 397 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 KLK15Q9H2R5 256 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 TAF9BQ9HBM6 251 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 SPACA1Q9HBV2 294 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 OR2S2Q9NQN1 319 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 CHCHD3Q9NX63 227 aaKnown RBP6.6□□□□□ -1.35
USP28-203ENST00000537490 CKLFQ9UBR5 152 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 ZNF107Q9UII5 783 aaPredicted RBP6.6□□□□□ -1.35
USP28-203ENST00000537490 WSB1Q9Y6I7 421 aa6.6□□□□□ -1.35
USP28-203ENST00000537490 SEC14L6B5MCN3 397 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 G3V318 75 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 CA11O75493 328 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 CRTAPO75718 401 aaPredicted RBP6.59□□□□□ -1.35
USP28-203ENST00000537490 SC5DO75845 299 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 NHLRC4P0CG21 123 aaPredicted RBP6.59□□□□□ -1.35
USP28-203ENST00000537490 MGMTP16455 207 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 FUT3P21217 361 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 CNTFRP26992 372 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 PPIFP30405 207 aaKnown RBP6.59□□□□□ -1.35
USP28-203ENST00000537490 ST3GAL4Q11206 333 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 LSAMPQ13449 338 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 FHL3Q13643 280 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 MMDQ15546 238 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 LRRC36Q1X8D7 754 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 TMEM30BQ3MIR4 351 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 NKAPLQ5M9Q1 402 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 ASPHD1Q5U4P2 390 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 LAIR2Q6ISS4 152 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 TRAT1Q6PIZ9 186 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 CDH26Q8IXH8 852 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 ODF3L1Q8IXM7 274 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 OR11H1Q8NG94 326 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 MRPL30Q8TCC3 161 aaKnown RBP6.59□□□□□ -1.35
USP28-203ENST00000537490 MYOZ3Q8TDC0 251 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 C4orf3Q8WVX3 66 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 CYGBQ8WWM9 190 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 Q96M66 194 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 DERL3Q96Q80 235 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 ASCL2Q99929 193 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 NABP2Q9BQ15 211 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 MRPL20Q9BYC9 149 aaKnown RBP6.59□□□□□ -1.35
USP28-203ENST00000537490 GNB4Q9HAV0 340 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 RAB9BQ9NP90 201 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 MBNL3Q9NUK0 354 aaKnown RBP6.59□□□□□ -1.35
USP28-203ENST00000537490 ZNF580Q9UK33 172 aa6.59□□□□□ -1.35
USP28-203ENST00000537490 NBEAL2Q6ZNJ1 2754 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 IGHV7-81A0A0B4J1V7 117 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 FAM90A10PA6NDY2 464 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 FAM90A7PA6NKC0 464 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 FAM90A23PA8MXZ1 464 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 YPEL1O60688 119 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 PDCD6O75340 191 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 GLAP06280 429 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 OR5H8P0DN80 308 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 CELP19835 753 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 PPP1CCP36873 323 aaKnown RBP6.58□□□□□ -1.36
USP28-203ENST00000537490 CAPGP40121 348 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 OR3A3P47888 321 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 ACTBP60709 375 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 MED21Q13503 144 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 ZNF260Q3ZCT1 412 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 TTC23Q5W5X9 447 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 ZNF491Q8N8L2 437 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 OR1N2Q8NGR9 330 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 FAM46BQ96A09 425 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 YPEL2Q96QA6 119 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 OR5B12Q96R08 314 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 ABHD14AQ9BUJ0 271 aa6.58□□□□□ -1.36
USP28-203ENST00000537490 ANKRD60Q9BZ19 345 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms