RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 TMEM204Q9BSN7 226 aa9.33□□□□□ -0.92
CLIP1-209ENST00000537178 CLN8Q9UBY8 286 aa9.33□□□□□ -0.92
CLIP1-209ENST00000537178 MIOXQ9UGB7 285 aa9.33□□□□□ -0.92
CLIP1-209ENST00000537178 IL19Q9UHD0 177 aa9.33□□□□□ -0.92
CLIP1-209ENST00000537178 PAM16Q9Y3D7 125 aa9.33□□□□□ -0.92
CLIP1-209ENST00000537178 ZNF735P0CB33 412 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 ID4P47928 161 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 NXPH1P58417 271 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 HYAL1Q12794 435 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 POM121Q96HA1 1249 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 LHX9Q9NQ69 397 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 DIRC3C9JPN6 131 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 EML2O95834 649 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 CEBPDP49716 269 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-209ENST00000537178 MMDQ15546 238 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 RASL10BQ96S79 203 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 IL17BQ9UHF5 180 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 FFAR1O14842 300 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 MT-ND6P03923 174 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 PCMT1P22061 227 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 METAP1P53582 386 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 MFAP2P55001 183 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 ROM1Q03395 351 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 COL5A1-AS1Q5SY13 56 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 SSX8Q7RTT4 187 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 LINC00596Q86U02 117 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 ZNF519Q8TB69 540 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 VN1R17PQ8TDU5 208 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 ABHD3Q8WU67 409 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 TNFRSF19Q9NS68 423 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 NTMQ9P121 344 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 TMEM210A6NLX4 147 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 J3QR06 171 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 TNFSF14O43557 240 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 UQCRFS1P47985 274 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 KLF9Q13886 244 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-209ENST00000537178 C16orf47Q6ZP98 133 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-209ENST00000537178 RCC2Q9P258 522 aaKnown RBP9.32□□□□□ -0.92
CLIP1-209ENST00000537178 SERGEFQ9UGK8 458 aa9.32□□□□□ -0.92
CLIP1-209ENST00000537178 SCN8AQ9UQD0 1980 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 TMSB15BA0A087X1C1 80 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 LOC105371267A0A1B0GV96 52 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 OR4C45A6NMZ5 311 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 MAS1LP35410 378 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 FAM3BP58499 235 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-209ENST00000537178 TWIST1Q15672 202 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 ATG4DQ86TL0 474 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-209ENST00000537178 ADAT3Q96EY9 351 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-209ENST00000537178 OR2J1Q9GZK6 312 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 RNF122Q9H9V4 155 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 AUP1Q9Y679 476 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 NKX2-6A6NCS4 301 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 OR4C46A6NHA9 309 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 ZNF137PP52743 207 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 TAS2R60P59551 318 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 TRIP6Q15654 476 aaKnown RBP9.31□□□□□ -0.92
CLIP1-209ENST00000537178 UBE2V2Q15819 145 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 APOBEC4Q8WW27 367 aaKnown RBP9.31□□□□□ -0.92
CLIP1-209ENST00000537178 HIGD1AQ9Y241 93 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 FBLL1A6NHQ2 334 aaKnown RBP9.31□□□□□ -0.92
CLIP1-209ENST00000537178 HYPMO75409 117 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 CA2P00918 260 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 CT62P0C5K7 136 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 SERF2P84101 59 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 MESTQ5EB52 335 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 ZNF71Q9NQZ8 489 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-209ENST00000537178 FRRS1LQ9P0K9 344 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 NMUP48645 174 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 ZIC1Q15915 447 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 C21orf62-AS1Q17RA5 79 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 INO80CQ6PI98 192 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-209ENST00000537178 PTX4Q96A99 478 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 PGLYRP3Q96LB9 341 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 TXNDC17Q9BRA2 123 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 PAXXQ9BUH6 204 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 ELOVL1Q9BW60 279 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 OR2H1Q9GZK4 316 aa9.31□□□□□ -0.92
CLIP1-209ENST00000537178 DHRS7CA6NNS2 312 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 PRSS12P56730 875 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 GAB4Q2WGN9 574 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 HES3Q5TGS1 186 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 H1FOOQ8IZA3 346 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-209ENST00000537178 SGMS2Q8NHU3 365 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 GMPPAQ96IJ6 420 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-209ENST00000537178 SCNM1Q9BWG6 230 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 USP34Q70CQ2 3546 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.3□□□□□ -0.92
CLIP1-209ENST00000537178 TCRBV16S1A1N1A0A5B0 115 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 ERVH48-1M5A8F1 160 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 HYAL3O43820 417 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-209ENST00000537178 ERASQ7Z444 233 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 LYZL2Q7Z4W2 148 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 ZNF383Q8NA42 475 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 KIAA1671Q9BY89 1806 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 MMP16P51512 607 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 TCTAP57738 103 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 SPINK14Q6IE38 97 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 WFDC3Q8IUB2 231 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 PRR13Q9NZ81 148 aa9.3□□□□□ -0.92
CLIP1-209ENST00000537178 ATP6V0CP27449 155 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms