RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 COL27A1Q8IZC6 1860 aaPredicted RBP15.36■□□□□ 0.05
RAB40C-203ENST00000535977 LHX2P50458 406 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 ELLP55199 621 aaPredicted RBP15.36■□□□□ 0.05
RAB40C-203ENST00000535977 AARDQ4LEZ3 155 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 TMEM164Q5U3C3 297 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 LGI3Q8N145 548 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 CLDND2Q8NHS1 167 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 TOMM40LQ969M1 308 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 ZNF703Q9H7S9 590 aaPredicted RBP15.36■□□□□ 0.05
RAB40C-203ENST00000535977 SRD5A3Q9H8P0 318 aa15.36■□□□□ 0.05
RAB40C-203ENST00000535977 SCGB1D1O95968 90 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 RPL23AP62750 156 aaKnown RBP15.35■□□□□ 0.05
RAB40C-203ENST00000535977 ARF1P84077 181 aaKnown RBP15.35■□□□□ 0.05
RAB40C-203ENST00000535977 LIAT1Q6ZQX7 453 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 CPEB3Q8NE35 698 aaKnown RBP15.35■□□□□ 0.05
RAB40C-203ENST00000535977 REPIN1Q9BWE0 567 aaKnown RBP15.35■□□□□ 0.05
RAB40C-203ENST00000535977 FAM221AA4D161 298 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 NEURL1O76050 574 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 OPN1MWP04001 364 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 OPN1MW2P0DN77 364 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 OPN1MW3P0DN78 364 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 HERV-K104P61576 105 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 SP5Q6BEB4 398 aaPredicted RBP15.35■□□□□ 0.05
RAB40C-203ENST00000535977 LRP11Q86VZ4 500 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 ZNF611Q8N823 705 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 TMEM18Q96B42 140 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 LIME1Q9H400 295 aa15.35■□□□□ 0.05
RAB40C-203ENST00000535977 M0R296 226 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 SRPXP78539 464 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 ZNF442Q9H7R0 627 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 SLC7A10Q9NS82 523 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 SIAH2O43255 324 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 CD55P08174 381 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 MMP9P14780 707 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 BRS3P32247 399 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 ARR3P36575 388 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 MPLP40238 635 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 RAB11AP62491 216 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 RBX1P62877 108 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 SP6Q3SY56 376 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 WDR25Q64LD2 544 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-203ENST00000535977 APOBEC3DQ96AK3 386 aaPredicted RBP15.34■□□□□ 0.05
RAB40C-203ENST00000535977 C18orf12Q96KH6 178 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 SLC2A9Q9NRM0 540 aa15.34■□□□□ 0.05
RAB40C-203ENST00000535977 DUSP1P28562 367 aa15.33■□□□□ 0.05
RAB40C-203ENST00000535977 CLDN18P56856 261 aa15.33■□□□□ 0.05
RAB40C-203ENST00000535977 FBXW9Q5XUX1 488 aa15.33■□□□□ 0.05
RAB40C-203ENST00000535977 FAM90A2PQ658T7 463 aa15.33■□□□□ 0.05
RAB40C-203ENST00000535977 ZNF66Q6ZN08 573 aa15.33■□□□□ 0.05
RAB40C-203ENST00000535977 C9orf172C9J069 976 aa15.33■□□□□ 0.04
RAB40C-203ENST00000535977 PDLIM4P50479 330 aa15.33■□□□□ 0.04
RAB40C-203ENST00000535977 OR52M1Q8NGK5 317 aa15.33■□□□□ 0.04
RAB40C-203ENST00000535977 WFIKKN1Q96NZ8 548 aa15.33■□□□□ 0.04
RAB40C-203ENST00000535977 FKBP11Q9NYL4 201 aa15.33■□□□□ 0.04
RAB40C-203ENST00000535977 OR7C1O76099 320 aaPredicted RBP15.32■□□□□ 0.04
RAB40C-203ENST00000535977 FXYD4P59646 89 aa15.32■□□□□ 0.04
RAB40C-203ENST00000535977 EWSR1Q01844 656 aaKnown RBP eCLIP15.32■□□□□ 0.048e-7■■■■□ 22.8
RAB40C-203ENST00000535977 OR5I1Q13606 314 aa15.32■□□□□ 0.04
RAB40C-203ENST00000535977 IL13RA2Q14627 380 aa15.32■□□□□ 0.04
RAB40C-203ENST00000535977 CEACAM21Q3KPI0 293 aa15.32■□□□□ 0.04
RAB40C-203ENST00000535977 RNASE8Q8TDE3 154 aaKnown RBP15.32■□□□□ 0.04
RAB40C-203ENST00000535977 ZNF581Q9P0T4 197 aa15.32■□□□□ 0.04
RAB40C-203ENST00000535977 MRPL21Q7Z2W9 205 aaKnown RBP15.32■□□□□ 0.04
RAB40C-203ENST00000535977 LYZL2Q7Z4W2 148 aa15.32■□□□□ 0.04
RAB40C-203ENST00000535977 MKXQ8IYA7 352 aa15.32■□□□□ 0.04
RAB40C-203ENST00000535977 FGF12P61328 243 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 SRYQ05066 204 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 PNRC1Q12796 327 aaPredicted RBP15.31■□□□□ 0.04
RAB40C-203ENST00000535977 RNPS1Q15287 305 aaKnown RBP15.31■□□□□ 0.04
RAB40C-203ENST00000535977 MPV17LQ2QL34 196 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 CALHM1Q8IU99 346 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 OR56B2PQ8NGI1 322 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 MSI2Q96DH6 328 aaKnown RBP15.31■□□□□ 0.04
RAB40C-203ENST00000535977 PRRG4Q9BZD6 226 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 CALHM2Q9HA72 323 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 HPRT1P00492 218 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 TUBG1P23258 451 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 CD82P27701 267 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 CCKARP32238 428 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 PRSS12P56730 875 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 PRDX4Q13162 271 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 OR1C1Q15619 314 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 BATFQ16520 125 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 TUSC5Q8IXB3 177 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 ZDHHC23Q8IYP9 409 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 ACY3Q96HD9 319 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 SIGLEC12Q96PQ1 595 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 LAMP3Q9UQV4 416 aa15.31■□□□□ 0.04
RAB40C-203ENST00000535977 LOC102723971A0A1B0GUV8 181 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 IL6RP08887 468 aaPredicted RBP15.3■□□□□ 0.04
RAB40C-203ENST00000535977 TLE4Q04727 773 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 LPAL2Q16609 132 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 CDCP2Q5VXM1 449 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 BRICD5Q6PL45 260 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 APH1AQ96BI3 265 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 OR51B6Q9H340 312 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 PLK3Q9H4B4 646 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 DNAJC4Q9NNZ3 241 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 HSPA12AO43301 675 aa15.3■□□□□ 0.04
RAB40C-203ENST00000535977 PPYP01298 95 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms