RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 FAM24AA6NFZ4 105 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 ADAM20O43506 726 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 PSPNO60542 156 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 NMSQ5H8A3 153 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 SHEQ5VZ18 495 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 Q6ZS92 163 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 BHLHA15Q7RTS1 189 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-202ENST00000535906 LYRM2Q9NU23 88 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-202ENST00000535906 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 MEX3AA1L020 520 aaKnown RBP11.28□□□□□ -0.6
VPS33B-202ENST00000535906 IGSF23A1L1A6 192 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 OR5H1A6NKK0 313 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 H0Y980 276 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 KLK10O43240 276 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 TIMM8AO60220 97 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-202ENST00000535906 PITX3O75364 302 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 C1QL1O75973 258 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 HAND1O96004 215 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 IGLV2-14P01704 120 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 VDAC1P21796 283 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 F2RP25116 425 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 NBL1P41271 181 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 RAB13P51153 203 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 P2RY6Q15077 328 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 TESK1Q15569 626 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 CXorf66Q5JRM2 361 aaPredicted RBP11.28□□□□□ -0.6
VPS33B-202ENST00000535906 RXFP4Q8TDU9 374 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 PLEKHF2Q9H8W4 249 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 SMCO4Q9NRQ5 59 aa11.28□□□□□ -0.6
VPS33B-202ENST00000535906 MBNL3Q9NUK0 354 aaKnown RBP11.28□□□□□ -0.6
VPS33B-202ENST00000535906 BSNQ9UPA5 3926 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 DMXL2Q8TDJ6 3036 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 NPIPB11E5RHQ5 1161 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.27□□□□□ -0.6
VPS33B-202ENST00000535906 K7N7A8 449 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 SSSCA1O60232 199 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 ACAA1P09110 424 aaPredicted RBP11.27□□□□□ -0.6
VPS33B-202ENST00000535906 KITLGP21583 273 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 PAX6P26367 422 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 ID3Q02535 119 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 AVPI1Q5T686 147 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 PRAMEF6Q5VXH4 476 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 OR10V1Q8NGI7 309 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 OR5D13Q8NGL4 314 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 OR51H1Q8NH63 302 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 IL22RA2Q969J5 263 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 BCL2L14Q9BZR8 327 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 EIF5A2Q9GZV4 153 aaKnown RBP11.27□□□□□ -0.6
VPS33B-202ENST00000535906 SLC25A31Q9H0C2 315 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 TAAR3PQ9P1P4 343 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 FAM215AQ9Y5M1 114 aa11.27□□□□□ -0.6
VPS33B-202ENST00000535906 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.27□□□□□ -0.61
VPS33B-202ENST00000535906 PROB1E7EW31 1015 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 CRYBA1P05813 215 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 ASCL1P50553 236 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 ZNF718Q3SXZ3 478 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 TMEM182Q6ZP80 229 aaPredicted RBP11.27□□□□□ -0.61
VPS33B-202ENST00000535906 BEND4Q6ZU67 534 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 TMEM252Q8N6L7 170 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.61
VPS33B-202ENST00000535906 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
VPS33B-202ENST00000535906 MAGT1Q9H0U3 335 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 CXXC4Q9H2H0 198 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 UFSP2Q9NUQ7 469 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 WIPI2Q9Y4P8 454 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 SLC25A15Q9Y619 301 aa11.27□□□□□ -0.61
VPS33B-202ENST00000535906 A6NLC8 198 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 COLCA2A8K830 154 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 TFF1P04155 84 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 MMP9P14780 707 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 VAMP2P63027 116 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 CLINT1Q14677 625 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 WDR82Q6UXN9 313 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 LFNGQ8NES3 379 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 HSPA12AO43301 675 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 PSG2P11465 335 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 GCH1P30793 250 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 MBNL2Q5VZF2 373 aaKnown RBP11.26□□□□□ -0.61
VPS33B-202ENST00000535906 ALKBH2Q6NS38 261 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 ZNF474Q6S9Z5 364 aaPredicted RBP11.26□□□□□ -0.61
VPS33B-202ENST00000535906 TMEM171Q8WVE6 324 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 PBDC1Q9BVG4 233 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 CADP27708 2225 aa11.26□□□□□ -0.61
VPS33B-202ENST00000535906 CACNA1DQ01668 2161 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 A0A0G2JRQ6 117 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 UMAD1C9J7I0 102 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 NXPH3O95157 252 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 TUBG1P23258 451 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 ATP6V0CP27449 155 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 S100GP29377 79 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 ETV3LQ6ZN32 361 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 ACP7Q6ZNF0 438 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 C15orf54Q8N8G6 183 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 TUBG2Q9NRH3 451 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 SPTBN2O15020 2390 aa11.25□□□□□ -0.61
VPS33B-202ENST00000535906 ANKRD11Q6UB99 2663 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms