RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 REREQ9P2R6 1566 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 A0A1W2PQD3 144 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 RBFOX3A6NFN3 312 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 OR5K4A6NMS3 321 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 TMEM250H0YL14 139 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 H3BN98 237 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 H3BP45 60 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 BHLHE40O14503 412 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 OR2F2O95006 317 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 GCGP01275 180 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 OR5AL1P0C617 328 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 SPNP16150 400 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 KDELR1P24390 212 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 CD24P25063 80 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 CD86P42081 329 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 CBX5P45973 191 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 HSPA13P48723 471 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 EFNA4P52798 201 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 CLDN6P56747 220 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 TAS2R20P59543 309 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 RHOAP61586 193 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 DEFA6Q01524 100 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 ACTBL2Q562R1 376 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 GDF5OSQ5U4N7 250 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 PRAMEF20Q5VT98 475 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 DGAT2L6Q6ZPD8 337 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 NANOGNBQ7Z5D8 188 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 SETD3Q86TU7 594 aaPredicted RBP-0.6□□□□□ -2.51
COPB1-212ENST00000534771 UMODL1-AS1Q8N2C9 162 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 YIPF7Q8N8F6 280 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 ACBD4Q8NC06 268 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 OR4C5Q8NGB2 326 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 OR9I1Q8NGQ6 314 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 FNDC9Q8TBE3 224 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 PIH1D2Q8WWB5 315 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 SLC7A6Q92536 515 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 CCDC127Q96BQ5 260 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 TSNAXQ99598 290 aaKnown RBP-0.6□□□□□ -2.51
COPB1-212ENST00000534771 ANP32EQ9BTT0 268 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 CDCA4Q9BXL8 241 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 COA1Q9GZY4 146 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 NAA50Q9GZZ1 169 aaKnown RBP-0.6□□□□□ -2.51
COPB1-212ENST00000534771 DEFB129Q9H1M3 183 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 SLC38A1Q9H2H9 487 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 NMRK1Q9NWW6 199 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 FIS1Q9Y3D6 152 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 KLF12Q9Y4X4 402 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 HECTD1Q9ULT8 2610 aa-0.6□□□□□ -2.51
COPB1-212ENST00000534771 SONP18583 2426 aaKnown RBP-0.6□□□□□ -2.51
COPB1-212ENST00000534771 CUL9Q8IWT3 2517 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 SYNRGQ9UMZ2 1314 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 TGP01266 2768 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 TPRP12270 2363 aaKnown RBP-0.61□□□□□ -2.51
COPB1-212ENST00000534771 EXPH5Q8NEV8 1989 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 RYR2Q92736 4967 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 IGF2RP11717 2491 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 FAM208BQ5VWN6 2430 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 A0A1B0GXF2 115 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 A0A1W2PRD5 423 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 OR11H12B2RN74 326 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 J3QLI3 93 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 TRDMT1O14717 391 aaKnown RBP-0.61□□□□□ -2.51
COPB1-212ENST00000534771 RNF13O43567 381 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 SPINK1P00995 79 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 CD8AP01732 235 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 NPPCP23582 126 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 STOMP27105 288 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 ATP6V0CP27449 155 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 GBX2P52951 348 aaPredicted RBP-0.61□□□□□ -2.51
COPB1-212ENST00000534771 RGS8P57771 180 aaPredicted RBP-0.61□□□□□ -2.51
COPB1-212ENST00000534771 TSPEAR-AS2P59090 65 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 XRCC4Q13426 336 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 PDK2Q15119 407 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 CEACAM16Q2WEN9 425 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 TWF2Q6IBS0 349 aaKnown RBP-0.61□□□□□ -2.51
COPB1-212ENST00000534771 LYZL1Q6UWQ5 148 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 SCGB1D4Q6XE38 83 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 Q6ZS92 163 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 SCD5Q86SK9 330 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 SLC13A5Q86YT5 568 aaPredicted RBP-0.61□□□□□ -2.51
COPB1-212ENST00000534771 C10orf107Q8IVU9 208 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 GABRG1Q8N1C3 465 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 OR51T1Q8NGJ9 327 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 OR4P4Q8NGL7 312 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 OR11H2Q8NH07 326 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 OR52E5Q8NH55 327 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 SUN5Q8TC36 379 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 AQP3Q92482 292 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 C9orf72Q96LT7 481 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 SERPINI1Q99574 410 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 EBNA1BP2Q99848 306 aaKnown RBP-0.61□□□□□ -2.51
COPB1-212ENST00000534771 CRLF2Q9HC73 371 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 CCNB1IP1Q9NPC3 277 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 RAB20Q9NX57 234 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 SCML1Q9UN30 329 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 CPAMD8Q8IZJ3 1885 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 PTPRBP23467 1997 aa-0.61□□□□□ -2.51
COPB1-212ENST00000534771 PIEZO1Q92508 2521 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 STAB2Q8WWQ8 2551 aa-0.62□□□□□ -2.51
COPB1-212ENST00000534771 LPAP08519 4548 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms