RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 GZMMP51124 257 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 TMBIM6P55061 237 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 DEFA1P59665 94 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 DEFA3P59666 94 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 GABARAPL2P60520 117 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 NCS1P62166 190 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 PRKCDQ05655 676 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CD300CQ08708 224 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF616Q08AN1 781 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 FADDQ13158 208 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 HES1Q14469 280 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 RBMY1FQ15415 496 aaKnown RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 TAF13Q15543 124 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF829Q3KNS6 432 aaPredicted RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CYBRD1Q53TN4 286 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 FAM76BQ5HYJ3 339 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CXorf66Q5JRM2 361 aaPredicted RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 C6orf141Q5SZD1 244 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 LRIF1Q5T3J3 769 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 TPTE2P1Q5T6R2 138 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 LGALS9CQ6DKI2 356 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 NANOGP8Q6NSW7 305 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 HAGHLQ6PII5 290 aaPredicted RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 DLEU7Q6UYE1 221 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 IL34Q6ZMJ4 242 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 MOB3CQ70IA8 216 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CCDC80Q76M96 950 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 DCXRQ7Z4W1 244 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ANGPTL5Q86XS5 388 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ZDHHC21Q8IVQ6 265 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 TIGD4Q8IY51 512 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 FAM71E2Q8N5Q1 922 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 COMMD1Q8N668 190 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF645Q8N7E2 425 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF491Q8N8L2 437 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CYB561A3Q8NBI2 242 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 OR13F1Q8NGS4 319 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 OR52J3Q8NH60 311 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 OR56B4Q8NH76 319 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 TRUB1Q8WWH5 349 aaKnown RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 AQP3Q92482 292 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 REEP6Q96HR9 211 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 PGAM5Q96HS1 289 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 AKR1E2Q96JD6 320 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 KCTD7Q96MP8 289 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CMTM3Q96MX0 182 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CGREF1Q99674 301 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 OVOL2Q9BRP0 275 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 COPS4Q9BT78 406 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 RTL8AQ9BWD3 113 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CLEC7AQ9BXN2 247 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CHST6Q9GZX3 395 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 TMEM38AQ9H6F2 299 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 KAT8Q9H7Z6 458 aaKnown RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 REEP1Q9H902 201 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 SCRT2Q9NQ03 307 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 RPRD1BQ9NQG5 326 aaKnown RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 C8orf4Q9NR00 106 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 SDR39U1Q9NRG7 319 aaPredicted RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ARMC1Q9NVT9 282 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 FAM118AQ9NWS6 357 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 PAK1IP1Q9NWT1 392 aaPredicted RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 SIGLEC8Q9NYZ4 499 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 DNAJB9Q9UBS3 223 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 HSPB7Q9UBY9 170 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 CD300AQ9UGN4 299 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ATPIF1Q9UII2 106 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ENPP5Q9UJA9 477 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF221Q9UK13 617 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 ERGIC3Q9Y282 383 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 MOB4Q9Y3A3 225 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 NOP16Q9Y3C1 178 aaKnown RBP2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 TPRKBQ9Y3C4 175 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 FBXO7Q9Y3I1 522 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 HSPE1-MOB4S4R3N1 261 aa2.23□□□□□ -2.05
CHMP4A-208ENST00000534106 A0A087WYN8 130 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PNMA8CA0A1B0GUJ8 204 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 LOC100130705A0A1B0GUX0 176 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 EFCAB10A6NFE3 127 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ANXA2P2A6NMY6 339 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 BUB1B-PAK6H3BSN5 160 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 M0QZK8 103 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 FXYD1O00168 92 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF593O00488 134 aaPredicted RBP2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 HSPB6O14558 160 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SLC22A1O15245 554 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PAGE4O60829 102 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 ZNF737O75373 536 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 SULT1C4O75897 302 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 CCNKO75909 580 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 RENP00797 406 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 CST4P01036 141 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 IGLV1-47P01700 117 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 IGLV1-51P01701 117 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 IGHG4P01861 327 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 PRSS2P07478 247 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 CD7P09564 240 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 OR8U8P0C7N1 319 aa2.22□□□□□ -2.05
CHMP4A-208ENST00000534106 CRHBPP24387 322 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms