RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 STUB1Q9UNE7 303 aa8.95□□□□□ -0.98
CMTM1-216ENST00000533078 A0A1W2PN81 502 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 MCRIP1C9JLW8 97 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 GEMIN2O14893 280 aaKnown RBP8.94□□□□□ -0.98
CMTM1-216ENST00000533078 NBR2O15453 112 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 HSPA12AO43301 675 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 CDRT1O95170 752 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 LGALS1P09382 135 aaKnown RBP8.94□□□□□ -0.98
CMTM1-216ENST00000533078 IGHV4-30-4P0DP06 118 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 GTF2F2P13984 249 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF93P35789 620 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-216ENST00000533078 CHRNA7P36544 502 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 GPR176Q14439 515 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 PLGLAQ15195 96 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 LIN54Q6MZP7 749 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 FAM53AQ6NSI3 398 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF497Q6ZNH5 498 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 SYS1Q8N2H4 156 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 RSRP1Q9BUV0 290 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 TOLLIPQ9H0E2 274 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 IL36GQ9NZH8 169 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 RNF150Q9ULK6 438 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 FOXA2Q9Y261 457 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-216ENST00000533078 AP4S1Q9Y587 144 aa8.94□□□□□ -0.98
CMTM1-216ENST00000533078 FAM90A10PA6NDY2 464 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 C12orf77C9JDV5 145 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 J3QRE1 110 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 SLC31A2O15432 143 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 FADS2O95864 444 aaKnown RBP8.93□□□□□ -0.98
CMTM1-216ENST00000533078 MT-ND4P03905 459 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 ARSBP15848 533 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 BLVRBP30043 206 aaPredicted RBP8.93□□□□□ -0.98
CMTM1-216ENST00000533078 POLR2IP36954 125 aaKnown RBP8.93□□□□□ -0.98
CMTM1-216ENST00000533078 SOX2P48431 317 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 KIAA0141Q14154 515 aaPredicted RBP8.93□□□□□ -0.98
CMTM1-216ENST00000533078 C5orf64Q2M2E5 130 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 SLC22A6Q4U2R8 563 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 SYT6Q5T7P8 510 aaPredicted RBP8.93□□□□□ -0.98
CMTM1-216ENST00000533078 DDI2Q5TDH0 399 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 ASCL4Q6XD76 172 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 AMIGO2Q86SJ2 522 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 LHFPL3Q86UP9 236 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 GPR148Q8TDV2 347 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 PDCD1LG2Q9BQ51 273 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 ABHD14AQ9BUJ0 271 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 ANKRD60Q9BZ19 345 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 ALX4Q9H161 411 aaPredicted RBP8.93□□□□□ -0.98
CMTM1-216ENST00000533078 TUBA4BQ9H853 241 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 EDA2RQ9HAV5 297 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 TMEM138Q9NPI0 162 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 OR2S2Q9NQN1 319 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 ETAA1Q9NY74 926 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 TAS2R4Q9NYW5 299 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 KCNIP1Q9NZI2 227 aa8.93□□□□□ -0.98
CMTM1-216ENST00000533078 IGHV4OR15-8A0A075B7B6 117 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 A0A087WW49 117 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 IGHV7-81A0A0B4J1V7 117 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 RGS11O94810 467 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 HBZP02008 142 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 HSPB1P04792 205 aaKnown RBP8.92□□□□□ -0.98
CMTM1-216ENST00000533078 SNRPGP62308 76 aaKnown RBP8.92□□□□□ -0.98
CMTM1-216ENST00000533078 CT45A1Q5HYN5 189 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 SLC25A30Q5SVS4 291 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 GTSCR1Q86UQ5 136 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 MINDY2Q8NBR6 621 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF439Q8NDP4 499 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 CT45A3Q8NHU0 189 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 Q96MT0 163 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 CKLFQ9UBR5 152 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 OAZ3Q9UMX2 235 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 EXOGQ9Y2C4 368 aaKnown RBP8.92□□□□□ -0.98
CMTM1-216ENST00000533078 A3GALT2U3KPV4 340 aa8.92□□□□□ -0.98
CMTM1-216ENST00000533078 ALMS1Q8TCU4 4167 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 MAGEA13PA6NCF6 341 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 A8MZ25 164 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 H0Y980 276 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 CA11O75493 328 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 BDKRB2P30411 391 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 TPPP2P59282 170 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF660Q6AZW8 331 aaPredicted RBP8.91□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF529Q6P280 563 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 OR4K15Q8NH41 348 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 TMEM106AQ96A25 262 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 LGALS12Q96DT0 336 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 MRPS24Q96EL2 167 aaKnown RBP8.91□□□□□ -0.98
CMTM1-216ENST00000533078 SLA2Q9H6Q3 261 aa8.91□□□□□ -0.98
CMTM1-216ENST00000533078 ISG20L2Q9H9L3 353 aaKnown RBP8.91□□□□□ -0.98
CMTM1-216ENST00000533078 IGHV3-11P01762 117 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 ZP3P21754 424 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 VHLP40337 213 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF134P52741 427 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 MORN2Q502X0 79 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 ACTBL2Q562R1 376 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 C1orf146Q5VVC0 180 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 RAB12Q6IQ22 244 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 ZNF554Q86TJ5 538 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 NPBQ8NG41 125 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 OR2AK2Q8NG84 335 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 OR1L1Q8NH94 360 aa8.9□□□□□ -0.98
CMTM1-216ENST00000533078 CENPNQ96H22 339 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms