RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 PRR18Q8N4B5 295 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 LINC00311Q8N616 119 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 C8orf31Q8N9H6 132 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 OR51D1Q8NGF3 324 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 OR1L1Q8NH94 360 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 FAM3DQ96BQ1 224 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 URM1Q9BTM9 101 aaKnown RBP12.31□□□□□ -0.44
CPSF1-210ENST00000532935 PRSS22Q9GZN4 317 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 LPAR5Q9H1C0 372 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 LIN7BQ9HAP6 207 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 TAF9BQ9HBM6 251 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 MBNL3Q9NUK0 354 aaKnown RBP12.31□□□□□ -0.44
CPSF1-210ENST00000532935 WNK1Q9H4A3 2382 aa12.31□□□□□ -0.44
CPSF1-210ENST00000532935 A0A1W2PPI3 338 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 SHISA3A0PJX4 238 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 PDCD5O14737 125 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 TIMM23O14925 209 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 RANBP1P43487 201 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 RAB7AP51149 207 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 BLCAPP62952 87 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 C2orf76Q3KRA6 126 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 Q3ZCU0 254 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 HES5Q5TA89 166 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 C22orf42Q6IC83 251 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 LINC00299Q6ZSB3 139 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 ZNF554Q86TJ5 538 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 OR8H3Q8N146 312 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 FAM89BQ8N5H3 189 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 KLHDC1Q8N7A1 406 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 CAPSLQ8WWF8 208 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 AKR1E2Q96JD6 320 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 OCSTAMPQ9BR26 566 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 SLC25A33Q9BSK2 321 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 PLEKHJ1Q9NW61 149 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 KCNIP1Q9NZI2 227 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 GNG12Q9UBI6 72 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 STEAP1Q9UHE8 339 aa12.3□□□□□ -0.44
CPSF1-210ENST00000532935 FAM90A9PA6NNJ1 464 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 SOCS1O15524 211 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 AIREO43918 545 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 OR2F2O95006 317 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 FAM106CPP0CH98 169 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 OR10A3P58181 314 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 LSAMPQ13449 338 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 HERPUD1Q15011 391 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 Q6ZS46 218 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 THNSL2Q86YJ6 484 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 DRAM1Q8N682 238 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 OR56B4Q8NH76 319 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 CFHR4Q92496 578 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 RBM14Q96PK6 669 aaKnown RBP12.29□□□□□ -0.44
CPSF1-210ENST00000532935 NAA50Q9GZZ1 169 aaKnown RBP12.29□□□□□ -0.44
CPSF1-210ENST00000532935 SERTAD4Q9NUC0 356 aa12.29□□□□□ -0.44
CPSF1-210ENST00000532935 TMEM272A0A1B0GTI8 110 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 M0QZ24 198 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 HSD17B6O14756 317 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 LDLRAD4O15165 306 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 SLC31A2O15432 143 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 NAPSAO96009 420 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 SNRNP70P08621 437 aaKnown RBP12.28□□□□□ -0.44
CPSF1-210ENST00000532935 VSIG10L2P0DP72 767 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 RAB3BP20337 219 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 IL3RAP26951 378 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 ZNF816Q0VGE8 651 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-210ENST00000532935 ARSJQ5FYB0 599 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-210ENST00000532935 SLC25A48Q6ZT89 311 aaKnown RBP12.28□□□□□ -0.44
CPSF1-210ENST00000532935 Q6ZTK2 550 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 C5orf24Q7Z6I8 188 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 ZNF439Q8NDP4 499 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 CHMP1AQ9HD42 196 aaPredicted RBP12.28□□□□□ -0.44
CPSF1-210ENST00000532935 OR2S2Q9NQN1 319 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 HSF4Q9ULV5 492 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 STUB1Q9UNE7 303 aa12.28□□□□□ -0.44
CPSF1-210ENST00000532935 IFITM5A6NNB3 132 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 FOXI3A8MTJ6 420 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-210ENST00000532935 GAPDHP04406 335 aaKnown RBP12.27□□□□□ -0.45
CPSF1-210ENST00000532935 FGF9P31371 208 aaPredicted RBP12.27□□□□□ -0.45
CPSF1-210ENST00000532935 REG1BP48304 166 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 VEGFCP49767 419 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 ZNF134P52741 427 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 TMEM50BP56557 158 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 HTD2P86397 168 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 PLA2G7Q13093 441 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 GNMTQ14749 295 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 HMGN3Q15651 99 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 CT45A1Q5HYN5 189 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 ZNF880Q6PDB4 577 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 TREML4Q6UXN2 200 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 Q6ZPA2 131 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 OR56B1Q8NGI3 324 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 CT45A3Q8NHU0 189 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 ST6GALNAC6Q969X2 333 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 TXNL4BQ9NX01 149 aaKnown RBP12.27□□□□□ -0.45
CPSF1-210ENST00000532935 AK3Q9UIJ7 227 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 JPT1Q9UK76 154 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 RAB22AQ9UL26 194 aa12.27□□□□□ -0.45
CPSF1-210ENST00000532935 IGHV1-3A0A0C4DH29 117 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 GADD45AP24522 165 aa12.26□□□□□ -0.45
CPSF1-210ENST00000532935 VDAC2P45880 294 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms