RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 SRSF6Q13247 344 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SMIM21Q3B7S5 101 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 FAM74A1Q5RGS3 127 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 RPL7L1Q6DKI1 246 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF818PQ6ZRF7 136 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 LYZL2Q7Z4W2 148 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 WDR86Q86TI4 376 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 MYPOPQ86VE0 399 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SELENOHQ8IZQ5 122 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SVBPQ8N300 66 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 OR2C3Q8N628 320 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 DMBX1Q8NFW5 382 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 OR1S2Q8NGQ3 325 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 LHFPL5Q8TAF8 219 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SECTM1Q8WVN6 248 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 PCNPQ8WW12 178 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 TMED6Q8WW62 240 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 RAB40CQ96S21 281 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SFXN3Q9BWM7 321 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SEC11CQ9BY50 192 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 PARD6GQ9BYG4 376 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 PLEKHF2Q9H8W4 249 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 RAB9BQ9NP90 201 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 ZC4H2Q9NQZ6 224 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF71Q9NQZ8 489 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 LYRM2Q9NU23 88 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 IL36RNQ9UBH0 155 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 DKK4Q9UBT3 224 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 LAMP3Q9UQV4 416 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 RCL1Q9Y2P8 373 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 UBE2J1Q9Y385 318 aaPredicted RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 LSM5Q9Y4Y9 91 aaKnown RBP4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 SLC25A15Q9Y619 301 aa4.82□□□□□ -1.64
ATPAF1-210ENST00000532925 CNOT1A5YKK6 2376 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 IGHV2OR16-5A0A0B4J2B6 119 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 BTBD17A6NE02 478 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 OOEPA6NGQ2 149 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 ZNF705EA8MWA4 302 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 PROB1E7EW31 1015 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 HSPA12AO43301 675 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 PGLYRP1O75594 196 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 RHBDL1O75783 438 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 HAND1O96004 215 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 CELA3BP08861 270 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 DANCRP0C864 163 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 GCH1P30793 250 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 CEACAM8P31997 349 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 NOVA1P51513 510 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 ARHGDIBP52566 201 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 EWSR1Q01844 656 aaKnown RBP eCLIP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 TSC22D1Q15714 1073 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 IGFBP7Q16270 282 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 MST1LQ2TV78 715 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 DEFB109BQ30KR1 87 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 TMEM30BQ3MIR4 351 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 MIDNQ504T8 468 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 C1orf185Q5T7R7 199 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 PXDC1Q5TGL8 231 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 VWA1Q6PCB0 445 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 BTNL8Q6UX41 500 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 DPPA3Q6W0C5 159 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 ACP7Q6ZNF0 438 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 BHLHA15Q7RTS1 189 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 GCNT2Q8N0V5 402 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 CNEP1R1Q8N9A8 125 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 NAXEQ8NCW5 288 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 OR52M1Q8NGK5 317 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 OR11L1Q8NGX0 322 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 PPP1R35Q8TAP8 253 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 RDH5Q92781 318 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 ANAPC16Q96DE5 110 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 STARD4Q96DR4 205 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 GNPNAT1Q96EK6 184 aaPredicted RBP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 LURAP1Q96LR2 239 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 TAAR6Q96RI8 345 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 TSNAXQ99598 290 aaKnown RBP4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 LRFN3Q9BTN0 628 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 ASF1BQ9NVP2 202 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 PRR13Q9NZ81 148 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 KCNIP1Q9NZI2 227 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 LUZP4Q9P127 313 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 CACFD1Q9UGQ2 172 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 MSRB2Q9Y3D2 182 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 SPEF1Q9Y4P9 236 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 WSB1Q9Y6I7 421 aa4.81□□□□□ -1.64
ATPAF1-210ENST00000532925 ARID1AO14497 2285 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 CFAP54Q96N23 3096 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 EP300Q09472 2414 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 IGLV3-9A0A075B6K5 115 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 IGHV1-18A0A0C4DH31 117 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 NKX2-6A6NCS4 301 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 SRRM5B3KS81 715 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 LGALS8O00214 317 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ITGB1BP1O14713 200 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 CDIPTO14735 213 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 MLNRO43193 412 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 ADAM20O43506 726 aa4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 TIMM8AO60220 97 aaPredicted RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 NDUFS6O75380 124 aaKnown RBP4.8□□□□□ -1.64
ATPAF1-210ENST00000532925 DFFBO76075 338 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms