RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RUNX1Q01196 453 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 ZNF117Q03924 483 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 ZNF260Q3ZCT1 412 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 TPTE2P1Q5T6R2 138 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 KIRREL2Q6UWL6 708 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 OR10S1Q8NGN2 331 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 SGMS2Q8NHU3 365 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 MRPL30Q8TCC3 161 aaKnown RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CT55Q8WUE5 264 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CST9LQ9H4G1 147 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CALHM2Q9HA72 323 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 SEPSECSQ9HD40 501 aaKnown RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 GCM1Q9NP62 436 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CLN8Q9UBY8 286 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 PPP1R3CQ9UQK1 317 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 FLNBO75369 2602 aaKnown RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 TRBV5-7A0A0A0MS05 114 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 GRIFINA4D1Z8 144 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 J3QRE1 110 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CBR3O75828 277 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CDKN2AP42771 156 aaKnown RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 RAB31Q13636 194 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 SMIM21Q3B7S5 101 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 FAM162BQ5T6X4 162 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 WDR74Q6RFH5 385 aaPredicted RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 ERASQ7Z444 233 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 D2HGDHQ8N465 521 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 OR52N5Q8NH56 324 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 SLC25A43Q8WUT9 341 aaPredicted RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 PLEKHA3Q9HB20 300 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 SDF2L1Q9HCN8 221 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 KCNIP1Q9NZI2 227 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CLCF1Q9UBD9 225 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 PEF1Q9UBV8 284 aaKnown RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CCDC168Q8NDH2 2452 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 C17orf112F2Z3M2 114 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 M0QZ24 198 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 HMGB3O15347 200 aaKnown RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 PITX3O75364 302 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 STAG3L3P0CL85 134 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 TDGF1P13385 188 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 COX5AP20674 150 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 PMP22Q01453 160 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 MALLQ13021 153 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 TMEM176BQ3YBM2 270 aaPredicted RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 BRICD5Q6PL45 260 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 LYZL2Q7Z4W2 148 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 ST6GALNAC3Q8NDV1 305 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 NINJ1Q92982 152 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 CISD1Q9NZ45 108 aaKnown RBP5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 B9D1Q9UPM9 204 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 COX11Q9Y6N1 276 aa5.92□□□□□ -1.46
TGFBR3-209ENST00000532540 COL4A4P53420 1690 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 MGAQ8IWI9 3026 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 A0A1B0GW64 132 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 SHISA8B8ZZ34 492 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 FOXS1O43638 330 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 NPIPB7O75200 414 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 CLDN1O95832 211 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 DBHP09172 617 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 FCGR2AP12318 317 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 PGCP20142 388 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 ARF6P62330 175 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 LCN2P80188 198 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 Q56UQ5 140 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 LIAT1Q6ZQX7 453 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 RPS19BP1Q86WX3 136 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 OR10G8Q8NGN5 311 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 OR5B3Q8NH48 314 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 ZNF501Q96CX3 271 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 CREBBPQ92793 2442 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 CLEC18AA5D8T8 446 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 A6NDN8 102 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 SERINC4A6NH21 518 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 CT62P0C5K7 136 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 ZNF735P0CB33 412 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 GCH1P30793 250 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 MEF2BQ02080 365 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 TGFBR3Q03167 851 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 HGFACQ04756 655 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 RPL18Q07020 188 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 ICAM4Q14773 271 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 GABRA6Q16445 453 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 PCK2Q16822 640 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 MYPOPQ86VE0 399 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 CLEC18CQ8NCF0 446 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 ADAMTS18Q8TE60 1221 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 ASB5Q8WWX0 329 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 NANOS1Q8WY41 292 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 ZNF764Q96H86 408 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 GFI1Q99684 422 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 CHRDL1Q9BU40 450 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 NXF5Q9H1B4 397 aaKnown RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 PLSCR2Q9NRY7 297 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 C19orf53Q9UNZ5 99 aaPredicted RBP5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 DOCK7Q96N67 2140 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 SNURFLB1AK76 121 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 KLF4O43474 513 aa5.91□□□□□ -1.46
TGFBR3-209ENST00000532540 P04436 131 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms