RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), human

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CD44-231	ENST00000531110	OR5D13	Q8NGL4	314 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	OR4X1	Q8NH49	305 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	OR13C6P	Q8NH95	151 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	SYNPR	Q8TBG9	265 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	GPR148	Q8TDV2	347 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	PP6455	Q8WZ26	134 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	TM4SF19	Q96DZ7	209 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	ADTRP	Q96IZ2	230 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	PGLYRP2	Q96PD5	576 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	TRIB3	Q96RU7	358 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	KXD1	Q9BQD3	176 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	C1QTNF4	Q9BXJ3	329 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	CHIA	Q9BZP6	476 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	NMES1	Q9C002	83 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	SPRY4	Q9C004	299 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	NXF5	Q9H1B4	397 aa	Known RBP	4.72	□□□□□ -1.65
CD44-231	ENST00000531110	WDR13	Q9H1Z4	485 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	MEPE	Q9NQ76	525 aa	Predicted RBP	4.72	□□□□□ -1.65
CD44-231	ENST00000531110	SIGLEC8	Q9NYZ4	499 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	KCNIP1	Q9NZI2	227 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	NUDT4	Q9NZJ9	180 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	C1RL	Q9NZP8	487 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	RNF115	Q9Y4L5	304 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	IER3IP1	Q9Y5U9	82 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	ETV7	Q9Y603	341 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	GLI3	P10071	1580 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	ADAMTS7	Q9UKP4	1686 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	TRPM7	Q96QT4	1865 aa		4.72	□□□□□ -1.65
CD44-231	ENST00000531110	DUOX1	Q9NRD9	1551 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	TRBV4-1	A0A0J9YWV2	114 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	FEZF1	A0PJY2	475 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	MAP1LC3B2	A6NCE7	125 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	CD300LB	A8K4G0	201 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110		H3BQ15	152 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	XKRY	O14609	159 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	NDUFS4	O43181	175 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	MLNR	O43193	412 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	ALOX12B	O75342	701 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	APOA2	P02652	100 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	ATP1B1	P05026	303 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	CXCL1	P09341	107 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	LINC00271	P0C7V0	271 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	TSPO	P30536	169 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	CFHR2	P36980	270 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	TFPI2	P48307	235 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	PRLHR	P49683	370 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	DUSP3	P51452	185 aa	Predicted RBP	4.71	□□□□□ -1.66
CD44-231	ENST00000531110	POLR2J	P52435	117 aa	Known RBP	4.71	□□□□□ -1.66
CD44-231	ENST00000531110	SEC61G	P60059	68 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	UBE2M	P61081	183 aa	Known RBP	4.71	□□□□□ -1.66
CD44-231	ENST00000531110	SLC35B1	P78383	322 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	AKR1C1	Q04828	323 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	PDE7A	Q13946	482 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	GNMT	Q14749	295 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	MMD	Q15546	238 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	DUSP5	Q16690	384 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	IZUMO4	Q1ZYL8	232 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	CCSMST1	Q4G0I0	132 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	PRR30	Q53SZ7	412 aa	Predicted RBP	4.71	□□□□□ -1.66
CD44-231	ENST00000531110	C6orf226	Q5I0X4	101 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	CXorf66	Q5JRM2	361 aa	Predicted RBP	4.71	□□□□□ -1.66
CD44-231	ENST00000531110	FAM182A	Q5T1J6	154 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	UTF1	Q5T230	341 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110		Q6Q795	121 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	TPRG1	Q6ZUI0	275 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	MARCH9	Q86YJ5	346 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OR4N5	Q8IXE1	308 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	ZNF683	Q8IZ20	524 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	ZNF567	Q8N184	647 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	TMEM116	Q8NCL8	245 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	GPR32P1	Q8NGA4	272 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OR4K17	Q8NGC6	315 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OR1B1	Q8NGR6	318 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OR6N2	Q8NGY6	317 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OR2T27	Q8NH04	317 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OR8S1	Q8NH09	359 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	SLC38A5	Q8WUX1	472 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	FGGY	Q96C11	551 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OXGR1	Q96P68	337 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	RHNO1	Q9BSD3	238 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	LMF2	Q9BU23	707 aa	Known RBP	4.71	□□□□□ -1.66
CD44-231	ENST00000531110	EFCAB11	Q9BUY7	163 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	ABHD6	Q9BV23	337 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	MAP1LC3B	Q9GZQ8	125 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	POLR2J3	Q9H1A7	115 aa	Known RBP	4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OR51I2	Q9H344	312 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.71	□□□□□ -1.66
CD44-231	ENST00000531110	RHOJ	Q9H4E5	214 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	RERGL	Q9H628	205 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	CYTL1	Q9NRR1	136 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	EHF	Q9NZC4	300 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	OR5V1	Q9UGF6	321 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	RABAC1	Q9UI14	185 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	DSPP	Q9NZW4	1301 aa		4.71	□□□□□ -1.66
CD44-231	ENST00000531110	ATG2A	Q2TAZ0	1938 aa		4.7	□□□□□ -1.66
CD44-231	ENST00000531110	PARP14	Q460N5	1801 aa		4.7	□□□□□ -1.66
CD44-231	ENST00000531110	PHLPP1	O60346	1717 aa		4.7	□□□□□ -1.66
CD44-231	ENST00000531110	TRAV9-1	A0A075B6T8	112 aa		4.7	□□□□□ -1.66
CD44-231	ENST00000531110	ZNF705F	A8MVS1	300 aa	Predicted RBP	4.7	□□□□□ -1.66
CD44-231	ENST00000531110		A8MZ25	164 aa		4.7	□□□□□ -1.66

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