RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 HTD2P86397 168 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 TESK1Q15569 626 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF141Q15928 474 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 PMCHL1Q16048 86 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 ABCA11PQ4W5N1 156 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 TXNDC8Q6A555 127 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 FAM57BQ71RH2 274 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 OR4F5Q8NH21 305 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 OR52N5Q8NH56 324 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 OR5P3Q8WZ94 311 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 KCNS1Q96KK3 526 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 RCHY1Q96PM5 261 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 CLEC7AQ9BXN2 247 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 CHODLQ9H9P2 273 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 MBNL1Q9NR56 388 aaKnown RBP6.67□□□□□ -1.34
PTPRK-219ENST00000531050 BRCA2P51587 3418 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 ALPK2Q86TB3 2170 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 LOC102725191A0A1B0GVB3 256 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 SPAARA0A1B0GVQ0 90 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 C1QTNF9BB2RNN3 333 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 M0R1X1 148 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 CRYGCP07315 174 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 ASAH2BP0C7U1 165 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 C1QTNF9P0C862 333 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 UCP1P25874 307 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 PAX9P55771 341 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 RNFT1Q5M7Z0 435 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 PRAMEF5Q5TYX0 476 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 PRAMEF6Q5VXH4 476 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.67□□□□□ -1.341e-6■■□□□ 14.2
PTPRK-219ENST00000531050 OR5AS1Q8N127 324 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 CDRT4Q8N9R6 151 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 SLC25A40Q8TBP6 338 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 LHX4Q969G2 390 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 OR10A2Q9H208 303 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 IL21Q9HBE4 155 aa6.67□□□□□ -1.34
PTPRK-219ENST00000531050 NXT1Q9UKK6 140 aaKnown RBP6.67□□□□□ -1.34
PTPRK-219ENST00000531050 MCTS1Q9ULC4 181 aaKnown RBP6.67□□□□□ -1.34
PTPRK-219ENST00000531050 IGLV1-36A0A0B4J1U3 117 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 SIRPB1O00241 398 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 PHF1O43189 567 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF324O75467 553 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 IFNA5P01569 189 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 IGKV1D-16P01601 117 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 CXCL10P02778 98 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 OR10J4P0C629 311 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 FRMD6-AS1P0C7T7 363 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF20P17024 532 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 PSMB3P49720 205 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 FUT6P51993 359 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 HLA-DRB5Q30154 266 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 ASTLQ6HA08 431 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 CBLN3Q6UW01 205 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 COLCA1Q6ZS62 124 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 OR10V1Q8NGI7 309 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 ST6GALNAC6Q969X2 333 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 GMPPAQ96IJ6 420 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 SSBP4Q9BWG4 385 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 MMP25Q9NPA2 562 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 SELENOKQ9Y6D0 94 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 TTRP02766 147 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF16P17020 682 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 RHOBP62745 196 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 POLR2LP62875 67 aaKnown RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 ODF1Q14990 250 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 SLC39A11Q8N1S5 342 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF114Q8NC26 417 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 OR10P1Q8NGE3 313 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 OR51T1Q8NGJ9 327 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 LIN37Q96GY3 246 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 ABHD14BQ96IU4 210 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 EAF1Q96JC9 268 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 HDHD3Q9BSH5 251 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 PSMG3Q9BT73 122 aaPredicted RBP6.66□□□□□ -1.34
PTPRK-219ENST00000531050 CHRDL1Q9BU40 450 aa6.66□□□□□ -1.34
PTPRK-219ENST00000531050 FAM231BA6NCW3 169 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 K7ESM1 405 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 CHST1O43916 411 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 AGFG2O95081 481 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 IGKV1D-33P01593 117 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 IGKV1-33P01594 117 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 SMIM17P0DL12 118 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 CPMP14384 443 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 EN2P19622 333 aaPredicted RBP6.65□□□□□ -1.34
PTPRK-219ENST00000531050 BLVRBP30043 206 aaPredicted RBP6.65□□□□□ -1.34
PTPRK-219ENST00000531050 SRD5A2P31213 254 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 ID3Q02535 119 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 TCTEX1D4Q5JR98 221 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 CCDC144NLQ6NUI1 221 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 PET117Q6UWS5 81 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 C19orf35Q6ZS72 473 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 TCEAL8Q8IYN2 117 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 ZNF295-AS1Q8N0V1 137 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 VN1R2Q8NFZ6 395 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 OR5D14Q8NGL3 314 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 SPSB1Q96BD6 273 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 NEIL1Q96FI4 390 aaPredicted RBP6.65□□□□□ -1.34
PTPRK-219ENST00000531050 TAAR3PQ9P1P4 343 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 CD207Q9UJ71 328 aa6.65□□□□□ -1.34
PTPRK-219ENST00000531050 ANXA10Q9UJ72 324 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms