RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 GLAP06280 429 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 CELP19835 753 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 FUT3P21217 361 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 F2RL1P55085 397 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 GPR50Q13585 617 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 STEAP3Q658P3 488 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 SIGIRRQ6IA17 410 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 LAIR2Q6ISS4 152 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 TRAT1Q6PIZ9 186 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 FAM71E2Q8N5Q1 922 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 RBMXL1Q96E39 390 aaKnown RBP12.39□□□□□ -0.43
CPSF1-205ENST00000531042 RAX2Q96IS3 184 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 CYYR1Q96J86 154 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 Q96M66 194 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 PSORS1C1Q9UIG5 152 aa12.39□□□□□ -0.43
CPSF1-205ENST00000531042 CCL24O00175 119 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 LANCL1O43813 399 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 CRTAPO75718 401 aaPredicted RBP12.38□□□□□ -0.43
CPSF1-205ENST00000531042 GNAO1P09471 354 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 WNT4P56705 351 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 CFHR3Q02985 330 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 FOXE3Q13461 319 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 MORN2Q502X0 79 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 CXorf66Q5JRM2 361 aaPredicted RBP12.38□□□□□ -0.43
CPSF1-205ENST00000531042 LCNL1Q6ZST4 164 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 NKAIN3Q8N8D7 197 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 RNF152Q8N8N0 203 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 HSPB9Q9BQS6 159 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 UQCC2Q9BRT2 126 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 TAF9BQ9HBM6 251 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 OR2S2Q9NQN1 319 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 PLCXD1Q9NUJ7 323 aa12.38□□□□□ -0.43
CPSF1-205ENST00000531042 MBNL3Q9NUK0 354 aaKnown RBP12.38□□□□□ -0.43
CPSF1-205ENST00000531042 DNAH9Q9NYC9 4486 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 UBE2QL1A1L167 161 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 MYL12BO14950 172 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 ELANEP08246 267 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 SOX6P35712 828 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 CDX1P47902 265 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-205ENST00000531042 KIR2DS1Q14954 304 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 C11orf87Q6NUJ2 197 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 UNQ9370/PRO34162Q6UXP9 181 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 AHSA2Q719I0 299 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 C8orf59Q8N0T1 100 aaPredicted RBP12.37□□□□□ -0.43
CPSF1-205ENST00000531042 MRPL30Q8TCC3 161 aaKnown RBP12.37□□□□□ -0.43
CPSF1-205ENST00000531042 THRSPQ92748 146 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 TFAP2CQ92754 450 aa12.37□□□□□ -0.43
CPSF1-205ENST00000531042 ZMAT5Q9UDW3 170 aaKnown RBP12.37□□□□□ -0.43
CPSF1-205ENST00000531042 PDCD6O75340 191 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 IGHG4P01861 327 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 MAPK3P27361 379 aaPredicted RBP12.36□□□□□ -0.43
CPSF1-205ENST00000531042 GP2P55259 537 aaKnown RBP12.36□□□□□ -0.43
CPSF1-205ENST00000531042 RAB25P57735 213 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 LSAMPQ13449 338 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 GNMTQ14749 295 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 RCN1Q15293 331 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 DEFB136Q30KP8 78 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 C5orf24Q7Z6I8 188 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 ZNF554Q86TJ5 538 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 NANOGP1Q8N7R0 232 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 OR52L2PQ8NGH6 319 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 OR8U1Q8NH10 309 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 FBLIM1Q8WUP2 373 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 FAM46BQ96A09 425 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 B9D2Q9BPU9 175 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 KCNIP1Q9NZI2 227 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 GHRLQ9UBU3 117 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 ZNF580Q9UK33 172 aa12.36□□□□□ -0.43
CPSF1-205ENST00000531042 IGF1P05019 195 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 VDAC1P21796 283 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 HTD2P86397 168 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 DGCR2P98153 550 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 CD69Q07108 199 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 ODF3L1Q8IXM7 274 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 BPIFB6Q8NFQ5 453 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 ABHD14AQ9BUJ0 271 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 CST11Q9H112 138 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 FKBP14Q9NWM8 211 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 ZNF107Q9UII5 783 aaPredicted RBP12.35□□□□□ -0.43
CPSF1-205ENST00000531042 JPT1Q9UK76 154 aa12.35□□□□□ -0.43
CPSF1-205ENST00000531042 SLC2A2P11168 524 aaPredicted RBP12.34□□□□□ -0.43
CPSF1-205ENST00000531042 PSMB8P28062 276 aa12.34□□□□□ -0.43
CPSF1-205ENST00000531042 PPP1CCP36873 323 aaKnown RBP12.34□□□□□ -0.43
CPSF1-205ENST00000531042 DCTN2Q13561 401 aaKnown RBP12.34□□□□□ -0.43
CPSF1-205ENST00000531042 INSL4Q14641 139 aa12.34□□□□□ -0.43
CPSF1-205ENST00000531042 C6orf141Q5SZD1 244 aa12.34□□□□□ -0.43
CPSF1-205ENST00000531042 OR5M8Q8NGP6 311 aa12.34□□□□□ -0.43
CPSF1-205ENST00000531042 KCTD7Q96MP8 289 aa12.34□□□□□ -0.43
CPSF1-205ENST00000531042 ERGIC3Q9Y282 383 aa12.34□□□□□ -0.43
CPSF1-205ENST00000531042 NBEAL2Q6ZNJ1 2754 aa12.34□□□□□ -0.43
CPSF1-205ENST00000531042 KMT2CQ8NEZ4 4911 aaKnown RBP12.33□□□□□ -0.44
CPSF1-205ENST00000531042 YPEL1O60688 119 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 RAMP3O60896 148 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 UBBP0CG47 229 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 OR5H8P0DN80 308 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 MYF6P23409 242 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 CHATP28329 748 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 LUMP51884 338 aaPredicted RBP12.33□□□□□ -0.44
CPSF1-205ENST00000531042 MMDQ15546 238 aa12.33□□□□□ -0.44
CPSF1-205ENST00000531042 ACSM3Q53FZ2 586 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms