RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 CXorf58Q96LI9 332 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 LURAP1Q96LR2 239 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 TAAR6Q96RI8 345 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 RAB40CQ96S21 281 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 TP53RKQ96S44 253 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 HIPK2Q9H2X6 1198 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SMDT1Q9H4I9 107 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 PLEKHF2Q9H8W4 249 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 PARP11Q9NR21 331 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 COA4Q9NYJ1 87 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 ZNF581Q9P0T4 197 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 ZNF629Q9UEG4 869 aaPredicted RBP4.69□□□□□ -1.66
PCF11-205ENST00000530906 TRAPPC2LQ9UL33 140 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 LAMP3Q9UQV4 416 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SLC25A15Q9Y619 301 aa4.69□□□□□ -1.66
PCF11-205ENST00000530906 SHANK1Q9Y566 2161 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 IGHV1-18A0A0C4DH31 117 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 IGKV1-6A0A0C4DH72 117 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 BTBD17A6NE02 478 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 MSGN1A6NI15 193 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 SRRM5B3KS81 715 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 CDIPTO14735 213 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 HS3ST1O14792 307 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 HSPA12AO43301 675 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 PITX3O75364 302 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 PGLYRP1O75594 196 aaPredicted RBP4.68□□□□□ -1.66
PCF11-205ENST00000530906 RHBDL1O75783 438 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 DFFBO76075 338 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 HEXAP06865 529 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 ADH4P08319 380 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 FAM157CP0CG43 387 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 ARHGDIBP52566 201 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 TMEM33P57088 247 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 TAS2R30P59541 319 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 HTD2P86397 168 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 PJVKQ0ZLH3 352 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 CATR1Q13166 79 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 TSC22D1Q15714 1073 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 SP6Q3SY56 376 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 MIDNQ504T8 468 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 BEX5Q5H9J7 111 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 SPATA46Q5T0L3 261 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 ACP7Q6ZNF0 438 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 ZNF818PQ6ZRF7 136 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 MRGPRGQ86SM5 289 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 WDR86Q86TI4 376 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 SELENOHQ8IZQ5 122 aaKnown RBP4.68□□□□□ -1.66
PCF11-205ENST00000530906 OR2C3Q8N628 320 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 ZNF610Q8N9Z0 462 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 RELL2Q8NC24 303 aaPredicted RBP4.68□□□□□ -1.66
PCF11-205ENST00000530906 LFNGQ8NES3 379 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 CD300LFQ8TDQ1 290 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 TMED6Q8WW62 240 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 GALMQ96C23 342 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 GNPNAT1Q96EK6 184 aaPredicted RBP4.68□□□□□ -1.66
PCF11-205ENST00000530906 GINS3Q9BRX5 216 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 C11orf1Q9H5F2 150 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 LYRM2Q9NU23 88 aaPredicted RBP4.68□□□□□ -1.66
PCF11-205ENST00000530906 ELOVL5Q9NYP7 299 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 LUZP4Q9P127 313 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 FBXL17Q9UF56 701 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 WASF3Q9UPY6 502 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 LSM5Q9Y4Y9 91 aaKnown RBP4.68□□□□□ -1.66
PCF11-205ENST00000530906 MMP24Q9Y5R2 645 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 FAM186AA6NE01 2351 aa4.68□□□□□ -1.66
PCF11-205ENST00000530906 VCANP13611 3396 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 IGLV3-9A0A075B6K5 115 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 IGKV1D-13A0A0B4J2D9 117 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 NKX2-6A6NCS4 301 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 A6NLC8 198 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 ZNF705EA8MWA4 302 aaPredicted RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 WRBO00258 174 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 ITGB1BP1O14713 200 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 MLNRO43193 412 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 KLK10O43240 276 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 SPINT2O43291 252 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 MED6O75586 246 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 SCGB1D2O95969 90 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 GRPP07492 148 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 IGKV1-13P0DP09 117 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 SPP1P10451 314 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 RCC1P18754 421 aaPredicted RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 GZMHP20718 246 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 TNFSF4P23510 183 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 MPV17P39210 176 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 CAV2P51636 162 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 UCNP55089 124 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 KLF3P57682 345 aaPredicted RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 RPL23AP62750 156 aaKnown RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 VAMP2P63027 116 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 FOXF2Q12947 444 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 SRSF6Q13247 344 aaKnown RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 PDCD1Q15116 288 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 TESK1Q15569 626 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 CR1LQ2VPA4 569 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 FAM74A1Q5RGS3 127 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 C10orf91Q5T1B1 145 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 RPL7L1Q6DKI1 246 aaKnown RBP4.67□□□□□ -1.66
PCF11-205ENST00000530906 WDR82Q6UXN9 313 aa4.67□□□□□ -1.66
PCF11-205ENST00000530906 DPPA3Q6W0C5 159 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms