RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TCTEX1D1Q8N7M0 179 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 MINDY2Q8NBR6 621 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 OR51A4Q8NGJ6 313 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 OR10K1Q8NGX5 313 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 UBALD1Q8TB05 177 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 CCDC107Q8WV48 283 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 MRPL48Q96GC5 212 aaKnown RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 MYCBPQ99417 103 aaPredicted RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 KIAA1456Q9P272 454 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 FOXA2Q9Y261 457 aaPredicted RBP6.92□□□□□ -1.3
VPS11-203ENST00000529545 ST3GAL6Q9Y274 331 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 HYDINQ4G0P3 5121 aa6.92□□□□□ -1.3
VPS11-203ENST00000529545 IGHV7-81A0A0B4J1V7 117 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 G3V2T6 193 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 H0Y980 276 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 AIPO00170 330 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 SLC16A6O15403 523 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 NBR2O15453 112 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 PAX4O43316 350 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 LANCL1O43813 399 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 IGLV1-51P01701 117 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 RAB3AP20336 220 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 EPHA2P29317 976 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 ALKBH1Q13686 389 aaKnown RBP6.91□□□□□ -1.3
VPS11-203ENST00000529545 FLOT2Q14254 428 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 C5orf64Q2M2E5 130 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 ATAD3CQ5T2N8 411 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 LINC00596Q86U02 117 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 GTSCR1Q86UQ5 136 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 OR8J1Q8NGP2 316 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 ABHD5Q8WTS1 349 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 TSEN15Q8WW01 171 aaKnown RBP6.91□□□□□ -1.3
VPS11-203ENST00000529545 S100A13Q99584 98 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 THTPAQ9BU02 230 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 TMED9Q9BVK6 235 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 ANKRD60Q9BZ19 345 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 IFT22Q9H7X7 185 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 RNF150Q9ULK6 438 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 DHDHQ9UQ10 334 aa6.91□□□□□ -1.3
VPS11-203ENST00000529545 CSMD3Q7Z407 3707 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 RBMY1BA6NDE4 496 aaKnown RBP6.9□□□□□ -1.3
VPS11-203ENST00000529545 RBMY1EA6NEQ0 496 aaKnown RBP6.9□□□□□ -1.3
VPS11-203ENST00000529545 OR4C45A6NMZ5 311 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 C12orf77C9JDV5 145 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 J3QLW9 94 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 GABRPO00591 440 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 SLC31A2O15432 143 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 IGHV3-11P01762 117 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 RBMY1DP0C7P1 496 aaKnown RBP6.9□□□□□ -1.3
VPS11-203ENST00000529545 ZNF19P17023 458 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 ZP3P21754 424 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 VHLP40337 213 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 RAB40BQ12829 278 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.3
VPS11-203ENST00000529545 PLGLAQ15195 96 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 CT45A1Q5HYN5 189 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 C6orf183Q5T699 404 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 ZNF660Q6AZW8 331 aaPredicted RBP6.9□□□□□ -1.3
VPS11-203ENST00000529545 HAPLN4Q86UW8 402 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 PRR18Q8N4B5 295 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 PARP16Q8N5Y8 322 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 ZNF439Q8NDP4 499 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 OR10V1Q8NGI7 309 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 OR52N1Q8NH53 320 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 CT45A3Q8NHU0 189 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 RBMXL1Q96E39 390 aaKnown RBP6.9□□□□□ -1.3
VPS11-203ENST00000529545 METTL9Q9H1A3 318 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 RIBC2Q9H4K1 309 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 PAK1IP1Q9NWT1 392 aaPredicted RBP6.9□□□□□ -1.3
VPS11-203ENST00000529545 TRAPPC2LQ9UL33 140 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 ING4Q9UNL4 249 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 A3GALT2U3KPV4 340 aa6.9□□□□□ -1.3
VPS11-203ENST00000529545 MCRIP1C9JLW8 97 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 CDRT1O95170 752 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 MT-ND4P03905 459 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 ZNF134P52741 427 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 RBM11P57052 281 aaKnown RBP6.89□□□□□ -1.31
VPS11-203ENST00000529545 TPPP2P59282 170 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 MPV17LQ2QL34 196 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 ACTBL2Q562R1 376 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 NHLRC3Q5JS37 347 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 SYT6Q5T7P8 510 aaPredicted RBP6.89□□□□□ -1.31
VPS11-203ENST00000529545 KDM4DQ6B0I6 523 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 LCN12Q6JVE5 192 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 TRAT1Q6PIZ9 186 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 ASCL4Q6XD76 172 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 ZNF497Q6ZNH5 498 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 ACBD7Q8N6N7 88 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 NPBQ8NG41 125 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 OR5AK2Q8NH90 309 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 CASTOR1Q8WTX7 329 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 PELI1Q96FA3 418 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 C4orf36Q96KX1 117 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 MS4A10Q96PG2 267 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 JAM3Q9BX67 310 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 SLA2Q9H6Q3 261 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 SPACA1Q9HBV2 294 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 RANGRFQ9HD47 186 aaPredicted RBP6.89□□□□□ -1.31
VPS11-203ENST00000529545 OR2S2Q9NQN1 319 aa6.89□□□□□ -1.31
VPS11-203ENST00000529545 TCRBV3S1A0A5B6 114 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms