RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 M0R135 149 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 BHLHE40O14503 412 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 XRCC2O43543 280 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 LANCL1O43813 399 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF253O75346 499 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 GMNNO75496 209 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 GADD45GO95257 159 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 CYB5R3P00387 301 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 IGHV1-69P01742 117 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 SNRPCP09234 159 aaKnown RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 CLUP10909 449 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 RPA2P15927 270 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 HIST1H1CP16403 213 aaKnown RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 MDKP21741 143 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 CALB2P22676 271 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 SLC25A1P53007 311 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 RAG2P55895 527 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 DEFA6Q01524 100 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 TSPAN31Q12999 210 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 GK3PQ14409 553 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 OR8G1Q15617 311 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 MPPED2Q15777 294 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 AANATQ16613 207 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 Q1RN00 199 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 UTF1Q5T230 341 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 METTL11BQ5VVY1 283 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 LYPD2Q6UXB3 125 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF620Q6ZNG0 422 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 MRPL21Q7Z2W9 205 aaKnown RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 OR5AS1Q8N127 324 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 OR10AD1Q8NGE0 317 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 OR2T4Q8NH00 348 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 LINC01006Q8NI28 216 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 TYMSOSQ8TAI1 123 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 GNPDA2Q8TDQ7 276 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 SPRYD4Q8WW59 207 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF799Q96GE5 643 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 ERMAPQ96PL5 475 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 NMNAT3Q96T66 252 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 PITX2Q99697 317 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 KCTD14Q9BQ13 255 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 NMNAT2Q9BZQ4 307 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 NSRP1Q9H0G5 558 aaKnown RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 TLNRD1Q9H1K6 362 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 OR52D1Q9H346 318 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 RGCCQ9H4X1 137 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 YY1AP1Q9H869 796 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 ABCB9Q9NP78 766 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 MRPL22Q9NWU5 206 aaKnown RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 PDP1Q9P0J1 537 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 DHRS4-AS1Q9P1J3 65 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF391Q9UJN7 358 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 PRPF19Q9UMS4 504 aaKnown RBP3.49□□□□□ -1.85
CSDE1-212ENST00000529046 BAIAP2Q9UQB8 552 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 RNF24Q9Y225 148 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 POLR1DQ9Y2S0 133 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 VWFP04275 2813 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 WNK2Q9Y3S1 2297 aa3.49□□□□□ -1.85
CSDE1-212ENST00000529046 A0A0U1RRA0 63 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 F5H5K5 113 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 K7EQM0 130 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 M0R1W7 72 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 HLA-DPB1P04440 258 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF823P16415 610 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 GALP22466 123 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 UCP1P25874 307 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 TGFBR2P37173 567 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 NAA10P41227 235 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-212ENST00000529046 MAGEA2P43356 314 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 TGM4P49221 684 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 CAV3P56539 151 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 PSME3P61289 254 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 GRB2P62993 217 aaKnown RBP3.48□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF85Q03923 595 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF92Q03936 586 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 TAF9Q16594 264 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 MICBQ29980 383 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 NCR3LG1Q68D85 454 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 ASPHD2Q6ICH7 369 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 RASSF6Q6ZTQ3 369 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 SLC36A1Q7Z2H8 476 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 NAA40Q86UY6 237 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 C11orf53Q8IXP5 236 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 FTMTQ8N4E7 242 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 FAM86B1Q8N7N1 296 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 MINDY2Q8NBR6 621 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 BHLHE23Q8NDY6 225 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 OR52H1Q8NGJ2 320 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 OR10Z1Q8NGY1 313 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 ZNF671Q8TAW3 534 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 FANK1Q8TC84 345 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 TNFRSF14Q92956 283 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 TECTBQ96PL2 329 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 TBX15Q96SF7 602 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 ADAT1Q9BUB4 502 aaKnown RBP3.48□□□□□ -1.85
CSDE1-212ENST00000529046 CDCA4Q9BXL8 241 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 CHIAQ9BZP6 476 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 RERGLQ9H628 205 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 MED4Q9NPJ6 270 aa3.48□□□□□ -1.85
CSDE1-212ENST00000529046 RPRD1BQ9NQG5 326 aaKnown RBP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms