RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ETV3LQ6ZN32 361 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 MFNGO00587 321 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 RAB29O14966 203 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 RCC1P18754 421 aaPredicted RBP12.89□□□□□ -0.35
USP47-207ENST00000527733 FOXG1P55316 489 aaPredicted RBP12.89□□□□□ -0.35
USP47-207ENST00000527733 BPIFB3P59826 476 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 SLC38A11Q08AI6 406 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 OR52L2PQ8NGH6 319 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 OR5C1Q8NGR4 320 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 MRGPRFQ96AM1 343 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 MALSU1Q96EH3 234 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 HES4Q9HCC6 221 aa12.89□□□□□ -0.35
USP47-207ENST00000527733 CENPFP49454 3210 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 IGHV1-69-2A0A0G2JMI3 117 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 UBE2L5PA0A1B0GUS4 154 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 K7N7A8 449 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 IGFBP3P17936 291 aaPredicted RBP12.88□□□□□ -0.35
USP47-207ENST00000527733 UNC119Q13432 240 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 TOR2AQ5JU69 321 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 LYZL2Q7Z4W2 148 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 WBP1Q96G27 269 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 ABHD14AQ9BUJ0 271 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 PLSCR4Q9NRQ2 329 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 GPR132Q9UNW8 380 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 UMAD1C9J7I0 102 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 ERVFRD-1P60508 538 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 OR10Z1Q8NGY1 313 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 TMEM230Q96A57 120 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 C1RLQ9NZP8 487 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 A0A1W2PN81 502 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 METTL15P1P0C7V9 234 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 RRASP10301 218 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 CHRNA7P36544 502 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 KIR2DL2P43627 348 aaPredicted RBP12.88□□□□□ -0.35
USP47-207ENST00000527733 FAM74A1Q5RGS3 127 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 CALHM1Q8IU99 346 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 NABP1Q96AH0 204 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 FLYWCH2Q96CP2 140 aaKnown RBP12.88□□□□□ -0.35
USP47-207ENST00000527733 LPAR2Q9HBW0 351 aa12.88□□□□□ -0.35
USP47-207ENST00000527733 ELF5Q9UKW6 265 aaPredicted RBP12.88□□□□□ -0.35
USP47-207ENST00000527733 CD37P11049 281 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 DAOP14920 347 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 CCL1P22362 96 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 TMEM267Q0VDI3 215 aaPredicted RBP12.87□□□□□ -0.35
USP47-207ENST00000527733 ZNF596Q8TC21 504 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 A0A1W2PPE3 182 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 IQCF6A8MYZ5 107 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 ETV2O00321 342 aaPredicted RBP12.87□□□□□ -0.35
USP47-207ENST00000527733 FAM122CQ6P4D5 195 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 FGFBP3Q8TAT2 258 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 OPN1MWP04001 364 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 OPN1MW2P0DN77 364 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 OPN1MW3P0DN78 364 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 MUC1P15941 1255 aaPredicted RBP12.87□□□□□ -0.35
USP47-207ENST00000527733 DOLPP1Q86YN1 238 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 HARBI1Q96MB7 349 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 ZNF319Q9P2F9 582 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 GNG13Q9P2W3 67 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 DUXBA0A1W2PPF3 345 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 OR7C2O60412 319 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 IL18BPO95998 194 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 SLC25A6P12236 298 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 CRYGSP22914 178 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 PXDC1Q5TGL8 231 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 TEX261Q6UWH6 196 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 OR1L1Q8NH94 360 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 CALYQ9NYX4 217 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 U3KQ87 197 aa12.87□□□□□ -0.35
USP47-207ENST00000527733 PKDREJQ9NTG1 2253 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 PSG2P11465 335 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 RPL11P62913 178 aaKnown RBP12.86□□□□□ -0.35
USP47-207ENST00000527733 OR11H7Q8NGC8 314 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 NPDC1Q9NQX5 325 aaPredicted RBP12.86□□□□□ -0.35
USP47-207ENST00000527733 K7ENP7 123 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 MOB3AQ96BX8 217 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 PCGF1Q9BSM1 259 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 TM2D1Q9BX74 207 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 SEBOXQ9HB31 216 aaPredicted RBP12.86□□□□□ -0.35
USP47-207ENST00000527733 DNAH12Q6ZR08 3092 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 A0A1B0GU03 582 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 F2RL2O00254 374 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 PDGFAP04085 211 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 OPRK1P41145 380 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 HTD2P86397 168 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 C11orf91Q3C1V1 193 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 ETFRF1Q6IPR1 90 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 CCDC144NLQ6NUI1 221 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 FAM219AQ8IW50 185 aa12.86□□□□□ -0.35
USP47-207ENST00000527733 OBSL1O75147 1896 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 NKX2-6A6NCS4 301 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 FAM157AC9JC47 383 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 K7EQM0 130 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 CHST1O43916 411 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 RHBDL1O75783 438 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 VSIG10L2P0DP72 767 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 SRP14P37108 136 aaKnown RBP12.85□□□□□ -0.35
USP47-207ENST00000527733 TNXAQ16473 311 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 SPINK9Q5DT21 86 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 RNFT1Q5M7Z0 435 aa12.85□□□□□ -0.35
USP47-207ENST00000527733 ZNF787Q6DD87 383 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms