RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SLC22A1O15245 554 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 SPINT2O43291 252 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 CA11O75493 328 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 IGHG2P01859 326 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 UCHL1P09936 223 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 MYF6P23409 242 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 CHATP28329 748 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 HTR2CP28335 458 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 CD1BP29016 333 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 ZNF137PP52743 207 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 F2RL1P55085 397 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 RPS25P62851 125 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 RPS27AP62979 156 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 TPBGQ13641 420 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 MED22Q15528 200 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 MORN2Q502X0 79 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 NKAPLQ5M9Q1 402 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 RBM48Q5RL73 367 aaKnown RBP8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 C6orf183Q5T699 404 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 LIPKQ5VXJ0 399 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 GLT8D1Q68CQ7 371 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 ETV3LQ6ZN32 361 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 OR4X2Q8NGF9 303 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 OR2T10Q8NGZ9 312 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 FAAP24Q9BTP7 215 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 SCN3BQ9NY72 215 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 GNG12Q9UBI6 72 aa8.23□□□□□ -1.09
PRPF40B-204ENST00000527253 NCBP2LA6PVI3 153 aaKnown RBP8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 SERPINE3A8MV23 424 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 TMEM14DPA8MWL7 114 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 UBBP0CG47 229 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 PF4V1P10720 104 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 PPP1CCP36873 323 aaKnown RBP8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 MAP2K4P45985 399 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 GPR12P47775 334 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 RPL23AP62750 156 aaKnown RBP8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 HSD17B12Q53GQ0 312 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 FOXB2Q5VYV0 432 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 TRAT1Q6PIZ9 186 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 C6orf201Q7Z4U5 140 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 TGIF2LXQ8IUE1 241 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 ODF3L1Q8IXM7 274 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 THRSPQ92748 146 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 RITA1Q96K30 269 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 S1PR3Q99500 378 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 TM2D1Q9BX74 207 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 ANKRD60Q9BZ19 345 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 CST11Q9H112 138 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 OR2S2Q9NQN1 319 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 AURKAIP1Q9NWT8 199 aaPredicted RBP8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 TPRKBQ9Y3C4 175 aa8.22□□□□□ -1.09
PRPF40B-204ENST00000527253 FOXI3A8MTJ6 420 aaPredicted RBP8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 SOCS1O15524 211 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 RGS10O43665 173 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 LANCL1O43813 399 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 NAPSAO96009 420 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 MOSP00540 346 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 HSMCR30P0CW71 290 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 CD33P20138 364 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 CRHBPP24387 322 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 IL3RAP26951 378 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 OR3A3P47888 321 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 P2RY14Q15391 338 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 HMGN3Q15651 99 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 TMEM30BQ3MIR4 351 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 KHDC1LQ5JSQ8 128 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 STEAP3Q658P3 488 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 ZNF880Q6PDB4 577 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 LCNL1Q6ZST4 164 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 OR2W3Q7Z3T1 314 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 SLC35E3Q7Z769 313 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 MRPL41Q8IXM3 137 aaKnown RBP8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 STPG2Q8N412 459 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 LINC00482Q8N8I6 264 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 CHPT1Q8WUD6 406 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 UFD1Q92890 307 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 NEDD4LQ96PU5 975 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 HSPB9Q9BQS6 159 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 TMEM59Q9BXS4 323 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 LPAR5Q9H1C0 372 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 ABCG5Q9H222 651 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 LIN7CQ9NUP9 197 aaKnown RBP8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 NECAP2Q9NVZ3 263 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 KCNIP1Q9NZI2 227 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 AK6Q9Y3D8 172 aaKnown RBP8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 DNAH3Q8TD57 4116 aa8.21□□□□□ -1.1
PRPF40B-204ENST00000527253 YPEL1O60688 119 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 PF4P02776 101 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 CPEP16870 476 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 BLVRBP30043 206 aaPredicted RBP8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 KRTAP10-11P60412 298 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 HTD2P86397 168 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 FABP5Q01469 135 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 PLA2G7Q13093 441 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 LSAMPQ13449 338 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 ZNF554Q86TJ5 538 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 FAM71E2Q8N5Q1 922 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 OR6M1Q8NGM8 313 aa8.2□□□□□ -1.1
PRPF40B-204ENST00000527253 KCNG3Q8TAE7 436 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms