RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 NUBP2Q9Y5Y2 271 aa10.47□□□□□ -0.73
SSSCA1-203ENST00000526877 BET1O15155 118 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 SPINT2O43291 252 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 DIRAS3O95661 229 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 TCRBP04435 133 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 SPNP16150 400 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 HNF1AP20823 631 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 CCR6P51684 374 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 RPL31P62899 125 aaKnown RBP10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 RBMS2Q15434 407 aaKnown RBP10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 PLA1AQ53H76 456 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 IGSF11Q5DX21 431 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 IDO2Q6ZQW0 420 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 PRR18Q8N4B5 295 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 OR13A1Q8NGR1 328 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 OR10J5Q8NHC4 309 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 TMEM158Q8WZ71 300 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 ARL11Q969Q4 196 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 SLC25A21Q9BQT8 299 aaPredicted RBP10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 GINS4Q9BRT9 223 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 CLN8Q9UBY8 286 aa10.46□□□□□ -0.73
SSSCA1-203ENST00000526877 TRBV23-1A0A0A0MS06 115 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 C12orf77C9JDV5 145 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 HSPA12AO43301 675 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 HBZP02008 142 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 MSMBP08118 114 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 GNB2P62879 340 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 SRSF2Q01130 221 aaKnown RBP10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 KRTAP24-1Q3LI83 254 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 DHRS11Q6UWP2 260 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 BTN2A1Q7KYR7 527 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 GLCCI1Q86VQ1 547 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 TERB2Q8NHR7 220 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 GIMAP1Q8WWP7 306 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 IL1F10Q8WWZ1 152 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 CORO2AQ92828 525 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 TMEM186Q96B77 213 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 KIRREL1Q96J84 757 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 SCGB3A2Q96PL1 93 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 DCTN5Q9BTE1 182 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 CABLES2Q9BTV7 478 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 MMP28Q9H239 520 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 LPAR2Q9HBW0 351 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 HIF1ANQ9NWT6 349 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 TAS2R3Q9NYW6 316 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 UBE2J1Q9Y385 318 aaPredicted RBP10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 LINC00312Q9Y6C7 94 aa10.45□□□□□ -0.74
SSSCA1-203ENST00000526877 TRBV6-7A0A0A0MS04 114 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 A0A1W2PPH5 198 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 ZNF729A6NN14 1252 aaPredicted RBP10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 F5H0A9 414 aaPredicted RBP10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 NDUFB6O95139 128 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 H2AFB2P0C5Z0 115 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 ZBTB25P24278 435 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 FCGR2CP31995 323 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 ECI1P42126 302 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 HERV-K104P61576 105 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 C11orf91Q3C1V1 193 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 ESCO2Q56NI9 601 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 CD276Q5ZPR3 534 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 WDR25Q64LD2 544 aaPredicted RBP10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 ZNF841Q6ZN19 808 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 C1orf229Q6ZS94 237 aaPredicted RBP10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 FAM185AQ8N0U4 392 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 FGFRL1Q8N441 504 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 OR1L1Q8NH94 360 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 CREB3L1Q96BA8 519 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 RAB39BQ96DA2 213 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 ZNF2Q9BSG1 426 aaPredicted RBP10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 GAL3ST2Q9H3Q3 398 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 C19orf12Q9NSK7 152 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 CALYQ9NYX4 217 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 ZNF69Q9UC07 566 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 FBN3Q75N90 2809 aa10.44□□□□□ -0.74
SSSCA1-203ENST00000526877 IGKV1-6A0A0C4DH72 117 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 KBTBD11-OT1A0A1B0GTJ5 212 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 FAM172BPA6NC97 362 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 NPIPB11E5RHQ5 1161 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 INMT-MINDY4F8WBC2 141 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 C15orf65H3BRN8 121 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 FCN3O75636 299 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 AVPP01185 164 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 IGHV2-5P01817 119 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 CGB3P0DN86 165 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 CGB7P0DN87 165 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 SSTR5P35346 364 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 HTD2P86397 168 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 HERPUD1Q15011 391 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 TMEM30BQ3MIR4 351 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 TMEM200BQ69YZ2 307 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 Q6ZNX1 250 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 C5orf24Q7Z6I8 188 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 ZDHHC22Q8N966 263 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 OR13C8Q8NGS7 320 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 RFESDQ8TAC1 157 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 UBALD1Q8TB05 177 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 ZNF714Q96N38 554 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 MARVELD1Q9BSK0 173 aa10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 SSBP3Q9BWW4 388 aaPredicted RBP10.43□□□□□ -0.74
SSSCA1-203ENST00000526877 C20orf85Q9H1P6 137 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms