RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PTPMT1Q8WUK0 201 aaPredicted RBP12.01□□□□□ -0.49
LRRK1-202ENST00000525284 WDFY2Q96P53 400 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 HOXC4P09017 264 aaPredicted RBP12.01□□□□□ -0.49
LRRK1-202ENST00000525284 SLC25A1P53007 311 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 TMEM50BP56557 158 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 OR51M1Q9H341 326 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 MYO18AQ92614 2054 aaKnown RBP12.01□□□□□ -0.49
LRRK1-202ENST00000525284 KIF13AQ9H1H9 1805 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 MOGAT3Q86VF5 341 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 MZB1Q8WU39 189 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 PMCHL2Q9BQD1 86 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 ARRDC1-AS1Q9H2J1 176 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 MMP25Q9NPA2 562 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 KLKB1P03952 638 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 BCL2P10415 239 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 FGF9P31371 208 aaPredicted RBP12.01□□□□□ -0.49
LRRK1-202ENST00000525284 CAPZBP47756 277 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 NUBP1P53384 320 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 CX3CL1P78423 397 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 OR11H7Q8NGC8 314 aa12.01□□□□□ -0.49
LRRK1-202ENST00000525284 VSIG10L2P0DP72 767 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 RAE1P78406 368 aaKnown RBP12□□□□□ -0.49
LRRK1-202ENST00000525284 NIT1Q86X76 327 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 KLF9Q13886 244 aaPredicted RBP12□□□□□ -0.49
LRRK1-202ENST00000525284 PAQR9Q6ZVX9 377 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 C17orf47Q8NEP4 570 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 OPN4Q9UHM6 478 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 KLK2P20151 261 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
LRRK1-202ENST00000525284 CNRIP1Q96F85 164 aaPredicted RBP12□□□□□ -0.49
LRRK1-202ENST00000525284 MRGPRX1Q96LB2 322 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 SIGLEC7Q9Y286 467 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 IGHV3OR15-7A0A075B7D8 119 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 PPYP01298 95 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 GDF9O60383 454 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 APOMO95445 188 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 RUNX1Q01196 453 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 EIF3IQ13347 325 aaKnown RBP12□□□□□ -0.49
LRRK1-202ENST00000525284 PQLC2Q6ZP29 291 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 ANKRD37Q7Z713 158 aa12□□□□□ -0.49
LRRK1-202ENST00000525284 MUC1P15941 1255 aaPredicted RBP11.99□□□□□ -0.49
LRRK1-202ENST00000525284 CCR5P51681 352 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 PWWP2BQ6NUJ5 590 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 PDLIM7Q9NR12 457 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 NPFFO15130 113 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 HLA-DQA1P01909 254 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 TMEM177Q53S58 311 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 PXMP4Q9Y6I8 212 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 GRIFINA4D1Z8 144 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 CDX4O14627 284 aaPredicted RBP11.99□□□□□ -0.49
LRRK1-202ENST00000525284 IGHV4-39P01824 125 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 TMIGD3P0DMS9 266 aaPredicted RBP11.99□□□□□ -0.49
LRRK1-202ENST00000525284 SURF2Q15527 256 aaPredicted RBP11.99□□□□□ -0.49
LRRK1-202ENST00000525284 TMEM249Q2WGJ8 235 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 DEFB123Q8N688 67 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 OR11H12B2RN74 326 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 SYNGR1O43759 233 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 C10orf128Q5T292 105 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 TEX29Q8N6K0 151 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 OR11H1Q8NG94 326 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 OR8B12Q8NGG6 310 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 OR11H2Q8NH07 326 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 CDIPTO14735 213 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 SPCS1Q9Y6A9 102 aa11.99□□□□□ -0.49
LRRK1-202ENST00000525284 PGPA6NDG6 321 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 FBXO46Q6PJ61 603 aaPredicted RBP11.98□□□□□ -0.49
LRRK1-202ENST00000525284 DNASE2BQ8WZ79 361 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 SDK1Q7Z5N4 2213 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 SMAD4Q13485 552 aaKnown RBP11.98□□□□□ -0.49
LRRK1-202ENST00000525284 SRSF12Q8WXF0 261 aaKnown RBP11.98□□□□□ -0.49
LRRK1-202ENST00000525284 MEGF9Q9H1U4 602 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 DDX60Q8IY21 1712 aaKnown RBP11.98□□□□□ -0.49
LRRK1-202ENST00000525284 A0A0B4J2E0 115 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 A0A1B0GX12 115 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 PITX3O75364 302 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 CD3EP07766 207 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 CTSSP25774 331 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 VEGFBP49765 207 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 CCL7P80098 99 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 ACVR1Q04771 509 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 OR4A5Q8NH83 315 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 ST6GALNAC6Q969X2 333 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 C18orf15Q96N68 181 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 HEXA-AS1Q9H8Q6 139 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 SLC52A3Q9NQ40 469 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 IL20Q9NYY1 176 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 RAB9AP51151 201 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 HBBP68871 147 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 MDP1Q86V88 176 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 SLC25A42Q86VD7 318 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 ALKBH7Q9BT30 221 aaPredicted RBP11.98□□□□□ -0.49
LRRK1-202ENST00000525284 H1FOOQ8IZA3 346 aaPredicted RBP11.98□□□□□ -0.49
LRRK1-202ENST00000525284 VN1R2Q8NFZ6 395 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 MVB12AQ96EY5 273 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 GALNT14Q96FL9 552 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 C14orf144Q96I85 54 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 KIR2DL4Q99706 377 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 CA10Q9NS85 328 aa11.98□□□□□ -0.49
LRRK1-202ENST00000525284 TMEFF2Q9UIK5 374 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms