RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	TRIP13	Q15645	432 aa	Predicted RBP	3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	CLEC12B	Q2HXU8	276 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	CDNF	Q49AH0	187 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	COQ5	Q5HYK3	327 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	THOC7	Q6I9Y2	204 aa	Known RBP	3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	PAGE2	Q7Z2X7	111 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	KRTAP11-1	Q8IUC1	163 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	TMEM156	Q8N614	296 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	ATP6V1C2	Q8NEY4	427 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	OR4K17	Q8NGC6	315 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	OR2AE1	Q8NHA4	323 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	LRRC19	Q9H756	370 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	PLEKHJ1	Q9NW61	149 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	IL20	Q9NYY1	176 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	HMGXB4	Q9UGU5	601 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	ROS1	P08922	2347 aa		3.22	□□□□□ -1.89
SREK1-213	ENST00000523655	IGHV1-69D	A0A0B4J2H0	117 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	ISPD	A4D126	451 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655		C9J4A7	227 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655		J3QT63	122 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	FGF16	O43320	207 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	MPZL2	O60487	215 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	PSIP1	O75475	530 aa	Known RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	SUPT3H	O75486	399 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	KLF7	O75840	302 aa	Predicted RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	SEMA3D	O95025	777 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	SNAP29	O95721	258 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	RAB36	O95755	333 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	IGKV1D-16	P01601	117 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	MMP7	P09237	267 aa	Predicted RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	COIL	P38432	576 aa	Predicted RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	CYB561	P49447	251 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	STC1	P52823	247 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	TAS2R46	P59540	309 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	LYZ	P61626	148 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	IL5RA	Q01344	420 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	CEACAM21	Q3KPI0	293 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	TMEM255A	Q5JRV8	349 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	C9orf129	Q5T035	196 aa	Known RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	KHDRBS2	Q5VWX1	349 aa	Known RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	CAMK2N1	Q7Z7J9	78 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	RPRML	Q8N4K4	120 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	OR4K2	Q8NGD2	314 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	LINC01560	Q8TB33	94 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	SLC37A2	Q8TED4	501 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	C17orf50	Q8WW18	174 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	CPNE4	Q96A23	557 aa	Predicted RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	RBBP8	Q99708	897 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	APOL4	Q9BPW4	351 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	SPNS1	Q9H2V7	528 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	TMEM27	Q9HBJ8	222 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	C12orf4	Q9NQ89	552 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	USE1	Q9NZ43	259 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	ANXA10	Q9UJ72	324 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	DOCK10	Q96BY6	2186 aa		3.21	□□□□□ -1.9
SREK1-213	ENST00000523655	SMIM26	A0A096LP01	95 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	KLLN	B2CW77	178 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	UBFD1	O14562	309 aa	Known RBP	3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	FABP7	O15540	132 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	SYNGR1	O43759	233 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	TRBV12-3	P01733	135 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	NEFH	P12036	1026 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	NELFE	P18615	380 aa	Known RBP	3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	CTRL	P40313	264 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	ACTR1B	P42025	376 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	MAGOH	P61326	146 aa	Known RBP	3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	INCA1	Q0VD86	236 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	MADCAM1	Q13477	382 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	IHH	Q14623	411 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	BCL2A1	Q16548	175 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	SLC36A2	Q495M3	483 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	PIGG	Q5H8A4	983 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	TTC32	Q5I0X7	151 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	AVPI1	Q5T686	147 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	HES5	Q5TA89	166 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	FBXW9	Q5XUX1	488 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	KDM4D	Q6B0I6	523 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	FAM92B	Q6ZTR7	304 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	CLEC20A	Q6ZU45	233 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	LGI3	Q8N145	548 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	SUMF2	Q8NBJ7	301 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	C19orf18	Q8NEA5	215 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	RNF138	Q8WVD3	245 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	FAM104A	Q969W3	186 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	YIPF6	Q96EC8	236 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	OR2M2	Q96R28	347 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	SAMD10	Q9BYL1	202 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	TOLLIP	Q9H0E2	274 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	ABCB9	Q9NP78	766 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	MMP26	Q9NRE1	261 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	TMEM100	Q9NV29	134 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	RBFOX1	Q9NWB1	397 aa	Known RBP	3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	MED29	Q9NX70	200 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	SIGLEC7	Q9Y286	467 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	CR1	P17927	2039 aa		3.2	□□□□□ -1.9
SREK1-213	ENST00000523655	CHD5	Q8TDI0	1954 aa		3.2	□□□□□ -1.9

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