RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ERVK13-1Q9NX77 482 aa17.54■□□□□ 0.4
PVT1-218ENST00000523328 SPINT2O43291 252 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 SOX15O60248 233 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 BLVRBP30043 206 aaPredicted RBP17.53■□□□□ 0.4
PVT1-218ENST00000523328 ZNF93P35789 620 aaPredicted RBP17.53■□□□□ 0.4
PVT1-218ENST00000523328 SRSF7Q16629 238 aaKnown RBP eCLIP17.53■□□□□ 0.43e-10■■■■■ 33.8
PVT1-218ENST00000523328 TMEM30BQ3MIR4 351 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 C19orf54Q5BKX5 351 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 ADAMTSL5Q6ZMM2 481 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 OR1L1Q8NH94 360 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 ARPC1AQ92747 370 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 ISOC1Q96CN7 298 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 GHITMQ9H3K2 345 aa17.53■□□□□ 0.4
PVT1-218ENST00000523328 IGHV4OR15-8A0A075B7B6 117 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 A0A087WW49 117 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 SNTNA6NMZ2 147 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 LDLRAD4O15165 306 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 HBZP02008 142 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 ALPLP05186 524 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 GABRB1P18505 474 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 GTF2A1P52655 376 aaPredicted RBP17.52■□□□□ 0.4
PVT1-218ENST00000523328 GBX2P52951 348 aaPredicted RBP17.52■□□□□ 0.4
PVT1-218ENST00000523328 C5orf64Q2M2E5 130 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 DDI2Q5TDH0 399 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 PRR18Q8N4B5 295 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 STX19Q8N4C7 294 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 OR4K15Q8NH41 348 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 TMEM138Q9NPI0 162 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 PAK1IP1Q9NWT1 392 aaPredicted RBP17.52■□□□□ 0.4
PVT1-218ENST00000523328 RCC2Q9P258 522 aaKnown RBP17.52■□□□□ 0.4
PVT1-218ENST00000523328 TRAPPC2LQ9UL33 140 aa17.52■□□□□ 0.4
PVT1-218ENST00000523328 NBR2O15453 112 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 OR8U9P0C7N5 309 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 IGHV4-30-4P0DP06 118 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 ADARB1P78563 741 aaKnown RBP17.51■□□□□ 0.39
PVT1-218ENST00000523328 NDPQ00604 133 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 C6orf183Q5T699 404 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 ODF3L1Q8IXM7 274 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 Q8N1Y9 231 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 GAPTQ8N292 157 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 GPR148Q8TDV2 347 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 TMEM106AQ96A25 262 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 ZNF251Q9BRH9 671 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 RAB9BQ9NP90 201 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 MRPS28Q9Y2Q9 187 aaKnown RBP17.51■□□□□ 0.39
PVT1-218ENST00000523328 FBXO7Q9Y3I1 522 aa17.51■□□□□ 0.39
PVT1-218ENST00000523328 TNCP24821 2201 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 ZNF780AO75290 641 aaPredicted RBP17.5■□□□□ 0.39
PVT1-218ENST00000523328 FADS2O95864 444 aaKnown RBP17.5■□□□□ 0.39
PVT1-218ENST00000523328 CD2P06729 351 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 LGALS1P09382 135 aaKnown RBP17.5■□□□□ 0.39
PVT1-218ENST00000523328 GTF2F2P13984 249 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 VEGFCP49767 419 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 SLC22A6Q4U2R8 563 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 MORN2Q502X0 79 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 LIN54Q6MZP7 749 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 NPBQ8NG41 125 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 CASTOR1Q8WTX7 329 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 S100A13Q99584 98 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 NABP2Q9BQ15 211 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 MRPL20Q9BYC9 149 aaKnown RBP17.5■□□□□ 0.39
PVT1-218ENST00000523328 C19orf73Q9NVV2 129 aa17.5■□□□□ 0.39
PVT1-218ENST00000523328 A0A1W2PN81 502 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 A8MZ25 164 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 NDUFA3O95167 84 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 RCC1P18754 421 aaPredicted RBP17.49■□□□□ 0.39
PVT1-218ENST00000523328 CHRNA7P36544 502 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 CRIP2P52943 208 aaPredicted RBP17.49■□□□□ 0.39
PVT1-218ENST00000523328 ECSCRQ19T08 205 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 ZIK1Q3SY52 487 aaPredicted RBP17.49■□□□□ 0.39
PVT1-218ENST00000523328 C1orf146Q5VVC0 180 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 XAF1Q6GPH4 301 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 ORAI1Q96D31 301 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 SPACA1Q9HBV2 294 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 AMBNQ9NP70 447 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 OR2S2Q9NQN1 319 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 ETAA1Q9NY74 926 aa17.49■□□□□ 0.39
PVT1-218ENST00000523328 MCRIP1C9JLW8 97 aa17.48■□□□□ 0.39
PVT1-218ENST00000523328 BDKRB2P30411 391 aa17.48■□□□□ 0.39
PVT1-218ENST00000523328 PPP3R1P63098 170 aa17.48■□□□□ 0.39
PVT1-218ENST00000523328 GNMTQ14749 295 aa17.48■□□□□ 0.39
PVT1-218ENST00000523328 LYPD6Q86Y78 171 aa17.48■□□□□ 0.39
PVT1-218ENST00000523328 OR4C12Q96R67 309 aa17.48■□□□□ 0.39
PVT1-218ENST00000523328 ABHD14AQ9BUJ0 271 aa17.48■□□□□ 0.39
PVT1-218ENST00000523328 EI24O14681 340 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 PITPNAQ00169 270 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 RAB40BQ12829 278 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 TRAT1Q6PIZ9 186 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 HAPLN4Q86UW8 402 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 OR52L2PQ8NGH6 319 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 OR52I1Q8NGK6 324 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 CYYR1Q96J86 154 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 ZNF184Q99676 751 aaPredicted RBP17.47■□□□□ 0.39
PVT1-218ENST00000523328 CST11Q9H112 138 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 TAF9BQ9HBM6 251 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 FOXA2Q9Y261 457 aaPredicted RBP17.47■□□□□ 0.39
PVT1-218ENST00000523328 ORC6Q9Y5N6 252 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 GMPPBQ9Y5P6 360 aa17.47■□□□□ 0.39
PVT1-218ENST00000523328 HSPA12AO43301 675 aa17.46■□□□□ 0.39
PVT1-218ENST00000523328 SC5DO75845 299 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms