RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 GNG12Q9UBI6 72 aa11.81□□□□□ -0.52
TRAPPC9-213ENST00000522504 OVOL1O14753 267 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 TXNL1O43396 289 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 LANCL1O43813 399 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 SOX15O60248 233 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 SAP30O75446 220 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 HBZP02008 142 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 CSTBP04080 98 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 LIMS3P0CW19 117 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 LIMS4P0CW20 117 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 OR5H8P0DN80 308 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 GP9P14770 177 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 RCC1P18754 421 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 BLVRBP30043 206 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 ACTBP60709 375 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 NDPQ00604 133 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 GNMTQ14749 295 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 MPV17LQ2QL34 196 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 LINC00596Q86U02 117 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 C10orf67Q8IYJ2 551 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 PRR18Q8N4B5 295 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 MINDY2Q8NBR6 621 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 GPR148Q8TDV2 347 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 TMEM106AQ96A25 262 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 ANKRD60Q9BZ19 345 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 TMEM138Q9NPI0 162 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 TPSG1Q9NRR2 321 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 RCC2Q9P258 522 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 RRP15Q9Y3B9 282 aaKnown RBP11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 FBXO7Q9Y3I1 522 aa11.8□□□□□ -0.52
TRAPPC9-213ENST00000522504 TRAV41A0A0B4J266 112 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 FADS2O95864 444 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 HLA-DRB1P01911 266 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 MRPL28Q13084 256 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 C19orf54Q5BKX5 351 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 ODF3L1Q8IXM7 274 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 GAPTQ8N292 157 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 OR13C5Q8NGS8 318 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 RHOXF1Q8NHV9 184 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 CITED4Q96RK1 184 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 CHCHD6Q9BRQ6 235 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 MRPL20Q9BYC9 149 aaKnown RBP11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 TRAPPC2LQ9UL33 140 aa11.79□□□□□ -0.52
TRAPPC9-213ENST00000522504 IGHV4OR15-8A0A075B7B6 117 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 A0A087WW49 117 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 SNTNA6NMZ2 147 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 SPINT2O43291 252 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 GTF2F2P13984 249 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 BDKRB2P30411 391 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 ALDH3A2P51648 485 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 RAB40BQ12829 278 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 MORN2Q502X0 79 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 ZFP1Q6P2D0 407 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 OR52L2PQ8NGH6 319 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 ARPC1AQ92747 370 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 ZNF184Q99676 751 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 TOLLIPQ9H0E2 274 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 S100A14Q9HCY8 104 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 PALMDQ9NP74 551 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 MRPS18AQ9NVS2 196 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 ETAA1Q9NY74 926 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 GMPPBQ9Y5P6 360 aa11.78□□□□□ -0.52
TRAPPC9-213ENST00000522504 TRAV8-7A0A075B6U6 113 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 H3BNX3 289 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 CD2P06729 351 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 SNRPBP14678 240 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 IGFBP3P17936 291 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 PPP1CCP36873 323 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 OR3A3P47888 321 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 PPP3R1P63098 170 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 C5orf64Q2M2E5 130 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 STEAP3Q658P3 488 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 RAB12Q6IQ22 244 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 ACSM6Q6P461 480 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 RPL22L1Q6P5R6 122 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 HAPLN4Q86UW8 402 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 STX19Q8N4C7 294 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 CBR4Q8N4T8 237 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 APH1BQ8WW43 257 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 MYCBPQ99417 103 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 NABP2Q9BQ15 211 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 TM2D3Q9BRN9 247 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 ZMAT4Q9H898 229 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 OR2S2Q9NQN1 319 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 ORC6Q9Y5N6 252 aa11.77□□□□□ -0.53
TRAPPC9-213ENST00000522504 MCRIP1C9JLW8 97 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 LINC01619G3V211 115 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 NBR2O15453 112 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 LALBAP00709 142 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 EGR2P11161 476 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 ETV1P50549 477 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 SRSF7Q16629 238 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 C6orf183Q5T699 404 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 OR2G6Q5TZ20 316 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 SIGIRRQ6IA17 410 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 LIN54Q6MZP7 749 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 ADAMTSL5Q6ZMM2 481 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 Q8N1Y9 231 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 NPBQ8NG41 125 aa11.76□□□□□ -0.53
TRAPPC9-213ENST00000522504 S100A13Q99584 98 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms