RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RAB7AP51149 207 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 ZNF134P52741 427 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 TMEM50BP56557 158 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 C11orf88Q6PI97 169 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 Q6ZS46 218 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 C16orf82Q7Z2V1 217 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 DRAM1Q8N682 238 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 DTX3Q8N9I9 347 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 CAPSLQ8WWF8 208 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 CFHR4Q92496 578 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 ARHGAP5-AS1Q96IT6 56 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 SLC25A33Q9BSK2 321 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 PRSS22Q9GZN4 317 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 LIN7BQ9HAP6 207 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 CHMP1AQ9HD42 196 aaPredicted RBP16.52■□□□□ 0.24
TRIM35-203ENST00000521253 OR2S2Q9NQN1 319 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 AK3Q9UIJ7 227 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 RAB22AQ9UL26 194 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 HSF4Q9ULV5 492 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 SSR3Q9UNL2 185 aa16.52■□□□□ 0.24
TRIM35-203ENST00000521253 VWFP04275 2813 aa16.52■□□□□ 0.23
TRIM35-203ENST00000521253 A0A0B4J203 849 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 OR2F2O95006 317 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 FAM106CPP0CH98 169 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 REG1BP48304 166 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 ZNF816Q0VGE8 651 aaPredicted RBP16.51■□□□□ 0.23
TRIM35-203ENST00000521253 GNMTQ14749 295 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 HMGN3Q15651 99 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 CT45A1Q5HYN5 189 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 ZNF880Q6PDB4 577 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 SLC25A48Q6ZT89 311 aaKnown RBP16.51■□□□□ 0.23
TRIM35-203ENST00000521253 Q6ZTK2 550 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 OR8H3Q8N146 312 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 KLHDC1Q8N7A1 406 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 OR52L2PQ8NGH6 319 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 OR56B1Q8NGI3 324 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 CT45A3Q8NHU0 189 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 RBM14Q96PK6 669 aaKnown RBP16.51■□□□□ 0.23
TRIM35-203ENST00000521253 HDHD3Q9BSH5 251 aaPredicted RBP16.51■□□□□ 0.23
TRIM35-203ENST00000521253 SERTAD4Q9NUC0 356 aa16.51■□□□□ 0.23
TRIM35-203ENST00000521253 SNRNP70P08621 437 aaKnown RBP16.5■□□□□ 0.23
TRIM35-203ENST00000521253 HTD2P86397 168 aa16.5■□□□□ 0.23
TRIM35-203ENST00000521253 PLAC9Q5JTB6 97 aa16.5■□□□□ 0.23
TRIM35-203ENST00000521253 THNSL2Q86YJ6 484 aa16.5■□□□□ 0.23
TRIM35-203ENST00000521253 SETD6Q8TBK2 473 aa16.5■□□□□ 0.23
TRIM35-203ENST00000521253 ST6GALNAC6Q969X2 333 aa16.5■□□□□ 0.23
TRIM35-203ENST00000521253 AKR1E2Q96JD6 320 aa16.5■□□□□ 0.23
TRIM35-203ENST00000521253 PECRQ9BY49 303 aa16.5■□□□□ 0.23
TRIM35-203ENST00000521253 RIMS4Q9H426 269 aaPredicted RBP16.5■□□□□ 0.23
TRIM35-203ENST00000521253 JPT1Q9UK76 154 aa16.5■□□□□ 0.23
TRIM35-203ENST00000521253 TRBV6-6A0A0A6YYG2 114 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 IGHV1-3A0A0C4DH29 117 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 GAPDHP04406 335 aaKnown RBP16.49■□□□□ 0.23
TRIM35-203ENST00000521253 VSIG10L2P0DP72 767 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 SLC2A2P11168 524 aaPredicted RBP16.49■□□□□ 0.23
TRIM35-203ENST00000521253 CD36P16671 472 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 GADD45AP24522 165 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 IL3RAP26951 378 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 PPP1CCP36873 323 aaKnown RBP16.49■□□□□ 0.23
TRIM35-203ENST00000521253 MORN2Q502X0 79 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 MOB1BQ7L9L4 216 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 GALMQ96C23 342 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 CHCHD6Q9BRQ6 235 aa16.49■□□□□ 0.23
TRIM35-203ENST00000521253 NOTOA8MTQ0 251 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 TNFAIP8O95379 198 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 TMEM95Q3KNT9 176 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 MOGAT2Q3SYC2 334 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 STEAP3Q658P3 488 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 MOB3BQ86TA1 216 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 TPRA1Q86W33 373 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 TSPAN14Q8NG11 270 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 RTN4IP1Q8WWV3 396 aaPredicted RBP16.48■□□□□ 0.23
TRIM35-203ENST00000521253 KCTD7Q96MP8 289 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 RNF167Q9H6Y7 350 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 C12orf4Q9NQ89 552 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 ABRACLQ9P1F3 81 aa16.48■□□□□ 0.23
TRIM35-203ENST00000521253 A0A087WXM4 84 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 LOC100506127A0A0U1RQW1 187 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 IGKV1D-33P01593 117 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 IGKV1-33P01594 117 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 AMY1AP04745 511 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 AMY2AP04746 511 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 RAB6AP20340 208 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 ZNF137PP52743 207 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 HES1Q14469 280 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 HERPUD1Q15011 391 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 ARSJQ5FYB0 599 aaPredicted RBP16.47■□□□□ 0.23
TRIM35-203ENST00000521253 IL1F10Q8WWZ1 152 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 ABHD14AQ9BUJ0 271 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 KCNK7Q9Y2U2 307 aa16.47■□□□□ 0.23
TRIM35-203ENST00000521253 CMYA5Q8N3K9 4069 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 IGHV3-72A0A0B4J1Y9 119 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 YPEL1O60688 119 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 SDC2P34741 201 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 VDAC2P45880 294 aaPredicted RBP16.46■□□□□ 0.23
TRIM35-203ENST00000521253 HNF4GQ14541 408 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 ABCA11PQ4W5N1 156 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 LYG1Q8N1E2 194 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 OR10R2Q8NGX6 335 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 PTX4Q96A99 478 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms