RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CDX1P47902 265 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-207ENST00000520451 LUMP51884 338 aaPredicted RBP11.89□□□□□ -0.51
CSMD1-207ENST00000520451 KIR2DS1Q14954 304 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 TRAT1Q6PIZ9 186 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 RNF152Q8N8N0 203 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 ZNF485Q8NCK3 441 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 SETD9Q8NE22 299 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 OR5M8Q8NGP6 311 aa11.89□□□□□ -0.51
CSMD1-207ENST00000520451 UBE2QL1A1L167 161 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 MYF6P23409 242 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 VHLP40337 213 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 TAS2R43P59537 309 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 CFHR3Q02985 330 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 ST3GAL4Q11206 333 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 LSAMPQ13449 338 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 LRRC36Q1X8D7 754 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 TTC23Q5W5X9 447 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 GAPTQ8N292 157 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 GGHQ92820 318 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 DERL3Q96Q80 235 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 TAF9BQ9HBM6 251 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 OR2S2Q9NQN1 319 aa11.88□□□□□ -0.51
CSMD1-207ENST00000520451 FAM90A10PA6NDY2 464 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 FAM90A7PA6NKC0 464 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 FAM90A23PA8MXZ1 464 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 LANCL1O43813 399 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 RAMP3O60896 148 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 CA11O75493 328 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 SC5DO75845 299 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 IGHG4P01861 327 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 SLC2A2P11168 524 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-207ENST00000520451 FUT3P21217 361 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 CAPGP40121 348 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 ADARB1P78563 741 aaKnown RBP11.87□□□□□ -0.51
CSMD1-207ENST00000520451 GNMTQ14749 295 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 MMDQ15546 238 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 C9orf66Q5T8R8 295 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 STEAP3Q658P3 488 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 CDH26Q8IXH8 852 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 C4orf3Q8WVX3 66 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 CYYR1Q96J86 154 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 Q96M66 194 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 KCTD7Q96MP8 289 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 WWC2-AS2Q96NR7 200 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 KCNIP1Q9NZI2 227 aa11.87□□□□□ -0.51
CSMD1-207ENST00000520451 ZNF107Q9UII5 783 aaPredicted RBP11.87□□□□□ -0.51
CSMD1-207ENST00000520451 EFCAB10A6NFE3 127 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 SEC14L6B5MCN3 397 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 PDCD6O75340 191 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 IGF1P05019 195 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 GLAP06280 429 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 OR5H8P0DN80 308 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 DOC2BQ14184 412 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 MORN2Q502X0 79 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 SIGIRRQ6IA17 410 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 DHRSXQ8N5I4 330 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 NKAIN3Q8N8D7 197 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 OR52L2PQ8NGH6 319 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 FAM46BQ96A09 425 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 PRR25Q96S07 402 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 ABHD14AQ9BUJ0 271 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 MBNL3Q9NUK0 354 aaKnown RBP11.86□□□□□ -0.51
CSMD1-207ENST00000520451 ZNF580Q9UK33 172 aa11.86□□□□□ -0.51
CSMD1-207ENST00000520451 EBAG9O00559 213 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 MYL12BO14950 172 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 VSIG8P0DPA2 414 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 CELP19835 753 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 PSMB8P28062 276 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 PPP1CCP36873 323 aaKnown RBP11.85□□□□□ -0.51
CSMD1-207ENST00000520451 NKAPLQ5M9Q1 402 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 C5orf24Q7Z6I8 188 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 LYPD6Q86Y78 171 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 MRPL30Q8TCC3 161 aaKnown RBP11.85□□□□□ -0.51
CSMD1-207ENST00000520451 UQCC2Q9BRT2 126 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 MRPL20Q9BYC9 149 aaKnown RBP11.85□□□□□ -0.51
CSMD1-207ENST00000520451 JPT1Q9UK76 154 aa11.85□□□□□ -0.51
CSMD1-207ENST00000520451 MAPK3P27361 379 aaPredicted RBP11.84□□□□□ -0.51
CSMD1-207ENST00000520451 ECI1P42126 302 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 WNT4P56705 351 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 ACTBP60709 375 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 FHL3Q13643 280 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 TMEM65Q6PI78 240 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 ZNF554Q86TJ5 538 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 PACRGLQ8N7B6 248 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 THRSPQ92748 146 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 ZNF251Q9BRH9 671 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 CST11Q9H112 138 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 C8orf4Q9NR00 106 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 PARP11Q9NR21 331 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 CNOT2Q9NZN8 540 aaKnown RBP11.84□□□□□ -0.51
CSMD1-207ENST00000520451 WSB1Q9Y6I7 421 aa11.84□□□□□ -0.51
CSMD1-207ENST00000520451 G3V318 75 aa11.83□□□□□ -0.52
CSMD1-207ENST00000520451 ATP6V0E1O15342 81 aa11.83□□□□□ -0.52
CSMD1-207ENST00000520451 RGS11O94810 467 aa11.83□□□□□ -0.52
CSMD1-207ENST00000520451 CD1AP06126 327 aa11.83□□□□□ -0.52
CSMD1-207ENST00000520451 GNAO1P09471 354 aa11.83□□□□□ -0.52
CSMD1-207ENST00000520451 NHLRC4P0CG21 123 aaPredicted RBP11.83□□□□□ -0.52
CSMD1-207ENST00000520451 CNTFRP26992 372 aa11.83□□□□□ -0.52
CSMD1-207ENST00000520451 HTD2P86397 168 aa11.83□□□□□ -0.52
CSMD1-207ENST00000520451 ZNF260Q3ZCT1 412 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms