RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 RBM39Q14498 530 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 HABP2Q14520 560 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 PDCD1Q15116 288 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 PEA15Q15121 130 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 C4orf46Q504U0 113 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM76BQ5HYJ3 339 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM74A1Q5RGS3 127 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 PRAMEF6Q5VXH4 476 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 NCR3LG1Q68D85 454 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 FAAP20Q6NZ36 180 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 STEAP1BQ6NZ63 245 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 FAHD2BQ6P2I3 314 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 WDR82Q6UXN9 313 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 Q6ZR03 302 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 CBLN2Q8IUK8 224 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 ZCCHC24Q8N2G6 241 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 RFLNBQ8N5W9 214 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 KIR3DL3Q8N743 410 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 ZDHHC22Q8N966 263 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 SCCPDHQ8NBX0 429 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 OR51S1Q8NGJ8 323 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 OR13C9Q8NGT0 318 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 CLDND2Q8NHS1 167 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 NANPQ8TBE9 248 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 RXFP4Q8TDU9 374 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF418Q8TF45 676 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 RNF141Q8WVD5 230 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 AQP3Q92482 292 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 SLC25A28Q96A46 364 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 SAT2Q96F10 170 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 FAHD2AQ96GK7 314 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 PDCD1LG2Q9BQ51 273 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 CMSS1Q9BQ75 279 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 URM1Q9BTM9 101 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF471Q9BX82 626 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 OR51I2Q9H344 312 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 GAL3ST2Q9H3Q3 398 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 POFUT1Q9H488 388 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 TUBA4BQ9H853 241 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 ZMAT3Q9HA38 289 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 SMCO4Q9NRQ5 59 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 SLC2A8Q9NY64 477 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 METTL1Q9UBP6 276 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 KAAG1Q9UBP8 84 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 POMT1Q9Y6A1 747 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 TEX15Q9BXT5 2789 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 AKAP6Q13023 2319 aa4.73□□□□□ -1.65
CTNNA1-220ENST00000520260 DCHS2Q6V1P9 2916 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 TEX13DA0A0J9YY54 714 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 hADV38S2A0JD32 116 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A10PA6NDY2 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A18PA6NE21 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A16PA6NEW6 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A20PA6NIJ5 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A8PA6NJQ4 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A7PA6NKC0 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 CEACAM18A8MTB9 384 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A22PA8MWA6 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A12PA8MX19 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A5PA8MXJ8 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A23PA8MXZ1 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 SSX5O60225 188 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 NDUFS7O75251 213 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 CA11O75493 328 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 HTR3BO95264 441 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 RAB3DO95716 219 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 CYB5R3P00387 301 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FBP1P09467 338 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A15PP0C7V4 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A13PP0C7W8 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A14PP0C7W9 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM90A24PP0C7X0 464 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF735P0CB33 412 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 FAM157CP0CG43 387 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 PGA5P0DJD9 388 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 TPT1P13693 172 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 ZNF16P17020 682 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 NDUFB7P17568 137 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 RCC1P18754 421 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 ZBTB25P24278 435 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 COL8A2P25067 703 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 ACKR3P25106 362 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 KIR3DL2P43630 455 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 NPBWR1P48145 328 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 SOX2P48431 317 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 CLDN12P56749 244 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 NANOS3P60323 173 aaKnown RBP4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 SMCO1Q147U7 214 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 MEF2DQ14814 521 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 HMGN3Q15651 99 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 KISS1Q15726 138 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM30BQ3MIR4 351 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 ATPAF1Q5TC12 328 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 GPR157Q5UAW9 335 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 AWAT2Q6E213 333 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 RAB12Q6IQ22 244 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 TMEM88Q6PEY1 159 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 TRAT1Q6PIZ9 186 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 SLC25A26Q70HW3 274 aa4.72□□□□□ -1.65
CTNNA1-220ENST00000520260 LYG2Q86SG7 212 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms