RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 PVRP15151 417 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 VDAC1P21796 283 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 GNRHRP30968 328 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 CCR5P51681 352 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 PSG4Q00888 419 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 FUT7Q11130 342 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 MS4A18Q3C1V0 323 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 SPIN3Q5JUX0 258 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 OR4A47Q6IF82 309 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.6□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF501Q96CX3 271 aaPredicted RBP11.6□□□□□ -0.55
PABPC1-208ENST00000519004 TMED7-TICAM2A0A0A6YYA0 188 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 NPIPA5E9PKD4 350 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 PIAS2O75928 621 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 ARF6P62330 175 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 TCEA2Q15560 299 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 SMIM21Q3B7S5 101 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 RAET1LQ5VY80 246 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 Q6ZPA2 131 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 NIT1Q86X76 327 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 WFDC8Q8IUA0 241 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 GPHA2Q96T91 129 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 LRFN3Q9BTN0 628 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 WDR61Q9GZS3 305 aaKnown RBP11.6□□□□□ -0.55
PABPC1-208ENST00000519004 MED29Q9NX70 200 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 NPIPA1Q9UND3 350 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 CACNA1IQ9P0X4 2223 aa11.6□□□□□ -0.55
PABPC1-208ENST00000519004 TMPRSS2O15393 492 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 VAMP5O95183 116 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 C3orf79P0CE67 100 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 PGCP20142 388 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 KIR2DS3Q14952 304 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 PRSS57Q6UWY2 283 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 ZNF114Q8NC26 417 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 TMEM234Q8WY98 164 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 PIGTQ969N2 578 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 KLHDC7BQ96G42 594 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 LYZL4Q96KX0 146 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 DGAT2Q96PD7 388 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 SLC25A22Q9H936 323 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 PHPT1Q9NRX4 125 aaPredicted RBP11.59□□□□□ -0.55
PABPC1-208ENST00000519004 HCFC1R1Q9NWW0 138 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 TBC1D29Q9UFV1 150 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 DPRXA6NFQ7 191 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 KIAA1324LA8MWY0 1029 aaPredicted RBP11.59□□□□□ -0.55
PABPC1-208ENST00000519004 H0YIG0 161 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 RBFOX2O43251 390 aaKnown RBP eCLIP11.59□□□□□ -0.553e-11■■□□□ 11.8
PABPC1-208ENST00000519004 CDC34P49427 236 aaPredicted RBP11.59□□□□□ -0.55
PABPC1-208ENST00000519004 DUSP3P51452 185 aaPredicted RBP11.59□□□□□ -0.55
PABPC1-208ENST00000519004 RNPS1Q15287 305 aaKnown RBP11.59□□□□□ -0.55
PABPC1-208ENST00000519004 WFDC12Q8WWY7 111 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 OR5P3Q8WZ94 311 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 CCDC3Q9BQI4 270 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 GNB4Q9HAV0 340 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 POLR1DQ9Y2S0 133 aa11.59□□□□□ -0.55
PABPC1-208ENST00000519004 TET1Q8NFU7 2136 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 A0A0G2JRQ6 117 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 CORTO00230 105 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 PAGE4O60829 102 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 SAP30O75446 220 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 NUDT14O95848 222 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 GP1BBP13224 206 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 GLB1P16278 677 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 OR1D4P47884 311 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 AMTP48728 403 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 PRRX1P54821 245 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 IGLV3-21P80748 117 aaPredicted RBP11.58□□□□□ -0.56
PABPC1-208ENST00000519004 ZNF77Q15935 545 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 BRICD5Q6PL45 260 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 DTX1Q86Y01 620 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 ATOH7Q8N100 152 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 OR10G6Q8NH81 332 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 HDAC8Q9BY41 377 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 SLC17A4Q9Y2C5 497 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 OR2T8A6NH00 312 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 EGR1P18146 543 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 GABRA2P47869 451 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 DAP3P51398 398 aaKnown RBP11.58□□□□□ -0.56
PABPC1-208ENST00000519004 ACSM6Q6P461 480 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 VWA1Q6PCB0 445 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 ADAMTS9Q9P2N4 1935 aa11.58□□□□□ -0.56
PABPC1-208ENST00000519004 TMEM131Q92545 1883 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 SAA2-SAA4A0A096LPE2 208 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 LOC102725191A0A1B0GVB3 256 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 PGPEP1LA6NFU8 196 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 NPIPA2E9PIF3 369 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 HCRTR1O43613 425 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 GFRA1P56159 465 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 DLX2Q07687 328 aaPredicted RBP11.57□□□□□ -0.56
PABPC1-208ENST00000519004 OR52L2PQ8NGH6 319 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 OR10V1Q8NGI7 309 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 RAB40CQ96S21 281 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 NXF5Q9H1B4 397 aaKnown RBP11.57□□□□□ -0.56
PABPC1-208ENST00000519004 PNRC2Q9NPJ4 139 aaKnown RBP11.57□□□□□ -0.56
PABPC1-208ENST00000519004 CTXND1A0A1B0GTU2 59 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 GAGE12BA1L429 117 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 GNB1P62873 340 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 PRTGQ2VWP7 1150 aa11.57□□□□□ -0.56
PABPC1-208ENST00000519004 AMMECR1LQ6DCA0 310 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms