RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 AKIRIN1Q9H9L7 192 aaPredicted RBP9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 STARD10Q9Y365 291 aa9.4□□□□□ -0.91
PCDHGA1-202ENST00000517417 CADP27708 2225 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 SPTBN5Q9NRC6 3674 aaKnown RBP9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 FREM3P0C091 2139 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 LOC390937A0A1W2PQ73 354 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 H3BQ15 152 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 LDLRAD4O15165 306 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 NKX2-8O15522 239 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 ZNF17P17021 662 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 PSG4Q00888 419 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 EWSR1Q01844 656 aaKnown RBP eCLIP9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 SRSF4Q08170 494 aaKnown RBP9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 SLC25A40Q8TBP6 338 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 LURAP1Q96LR2 239 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 CTDSP1Q9GZU7 261 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR51I2Q9H344 312 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 ONECUT1Q9UBC0 465 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 CACFD1Q9UGQ2 172 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 COX7A2P2O60397 106 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 HRASP01112 189 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 IGKV3-11P04433 115 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 AARDQ4LEZ3 155 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 PHYHD1Q5SRE7 291 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 FAM27BQ5VT28 67 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 ACSM6Q6P461 480 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 HES4Q9HCC6 221 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 RYDENQ9NUL5 291 aaKnown RBP9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 CHST1O43916 411 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 MPZP25189 248 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 LTBRP36941 435 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 CSN1S1P47710 185 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 FFAR4Q5NUL3 377 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 MOGAT3Q86VF5 341 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 TMEM251Q8N6I4 163 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 DNASE2BQ8WZ79 361 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 SH3BGRL3Q9H299 93 aa9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 METTL1Q9UBP6 276 aaKnown RBP9.39□□□□□ -0.91
PCDHGA1-202ENST00000517417 A0A1W2PR77 199 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 PPP1CCP36873 323 aaKnown RBP9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 FGF8P55075 233 aaPredicted RBP9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 DLK1P80370 383 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 ZNF705AQ6ZN79 300 aaPredicted RBP9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 RTN4RL2Q86UN3 420 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 MDP1Q86V88 176 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 TPRX1Q8N7U7 411 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 CXXC4Q9H2H0 198 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 PCNX1Q96RV3 2341 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 ZNF320A2RRD8 509 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 SEC14L6B5MCN3 397 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 TRDCB7Z8K6 153 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 PHOX2AO14813 284 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 TMEM50BP56557 158 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 BTNL8Q6UX41 500 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 SLC25A22Q9H936 323 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 DOCK8Q8NF50 2099 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 TRANK1O15050 2925 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 COLCA2A8K830 154 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 B4E171 279 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 TSPAN7P41732 249 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 ARL16Q0P5N6 197 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 KDF1Q8NAX2 398 aaPredicted RBP9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 DOCK9Q9BZ29 2069 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 IGHV1-45A0A0A0MS14 117 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 FAM157AC9JC47 383 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 VDAC1P21796 283 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 ATP6V0CP27449 155 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 RPEQ96AT9 228 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 FAM210BQ96KR6 192 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 PILRBQ9UKJ0 227 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 CBY1Q9Y3M2 126 aa9.38□□□□□ -0.91
PCDHGA1-202ENST00000517417 DANCRP0C864 163 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 OPRK1P41145 380 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 DYNLT3P51808 116 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 VMA21Q3ZAQ7 101 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 BHLHA15Q7RTS1 189 aaPredicted RBP9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 MOB3AQ96BX8 217 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 OBSL1O75147 1896 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 MAP1LC3B2A6NCE7 125 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 NKX2-6A6NCS4 301 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 DHRS7CA6NNS2 312 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 SPINK4O60575 86 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 SPSB2Q99619 263 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 RARRES2Q99969 163 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 MAP1LC3BQ9GZQ8 125 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 IL17BQ9UHF5 180 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 HEATR5AQ86XA9 2040 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 TRBV6-7A0A0A0MS04 114 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 hADV38S2A0JD32 116 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 OR5H1A6NKK0 313 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 J3QT63 122 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 DNPH1O43598 174 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 GATCO43716 136 aaKnown RBP9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 SYNGR2O43760 224 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 HAND1O96004 215 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 PGA4P0DJD7 388 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 CD200P41217 278 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 BPIFB3P59826 476 aa9.37□□□□□ -0.91
PCDHGA1-202ENST00000517417 H3F3AP84243 136 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms