RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 SAP30LQ9HAJ7 183 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 TMSB15BA0A087X1C1 80 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 AREGP15514 252 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 GCSHP23434 173 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 PGLYRP3Q96LB9 341 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 HES7Q9BYE0 225 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 CDC42EP3Q9UKI2 254 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 SEC16AO15027 2179 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 TRAV17A0A0B4J275 112 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 NPIPB8E9PQR5 432 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 TNFSF14O43557 240 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 RECKO95980 971 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 PPP1CAP62136 330 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 SLC23A3Q6PIS1 610 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 LOC107984156A0A0G2JMH3 177 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 COX7A1P24310 79 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 ARL17AQ8IVW1 177 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 TMEM38BQ9NVV0 291 aa11.62□□□□□ -0.55
TCOF1-214ENST00000515035 IGHV1OR21-1A0A087WYE8 117 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 TRAV39A0A0B4J263 110 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 LIPT2A6NK58 231 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 WNT5AP41221 380 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 CYB5R2Q6BCY4 276 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 ANKRD37Q7Z713 158 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 ZAR1Q86SH2 424 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 CLN8Q9UBY8 286 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 PQLC2LA1A4F0 135 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 TRIP6Q15654 476 aaKnown RBP11.61□□□□□ -0.55
TCOF1-214ENST00000515035 CHST5Q9GZS9 411 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 CXXC4Q9H2H0 198 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 PLA2G3Q9NZ20 509 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 NPTNQ9Y639 398 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 TRGV8A0A0C4DH27 118 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 PNLIPP16233 465 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 SLC25A34Q6PIV7 304 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 PTPMT1Q8WUK0 201 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-214ENST00000515035 RAB37Q96AX2 223 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 PRNDQ9UKY0 176 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 COLQQ9Y215 455 aaPredicted RBP11.61□□□□□ -0.55
TCOF1-214ENST00000515035 A0A1W2PPC1 479 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 GNG7O60262 68 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 TRGC1P0CF51 173 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 ZNF841Q6ZN19 808 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 OR8I2Q8N0Y5 310 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 ZBTB34Q8NCN2 500 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 TREM2Q9NZC2 230 aa11.61□□□□□ -0.55
TCOF1-214ENST00000515035 LOC389332A0A1B0GUA5 103 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 CDIPTO14735 213 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 CD1AP06126 327 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 SNRNP40Q96DI7 357 aaKnown RBP11.6□□□□□ -0.55
TCOF1-214ENST00000515035 METTL1Q9UBP6 276 aaKnown RBP11.6□□□□□ -0.55
TCOF1-214ENST00000515035 TMEM238LA0A1B0GVL6 79 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 A6NJY4 79 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 A8MWL6 223 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 HLA-DQA1P01909 254 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 CD1BP29016 333 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 PRRX1P54821 245 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 TNFAIP6P98066 277 aaPredicted RBP11.6□□□□□ -0.55
TCOF1-214ENST00000515035 OR1N2Q8NGR9 330 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 TM4SF19Q96DZ7 209 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 ZFC3H1O60293 1989 aaKnown RBP11.6□□□□□ -0.55
TCOF1-214ENST00000515035 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.6□□□□□ -0.55
TCOF1-214ENST00000515035 RPL36A-HNRNPH2H7BZ11 118 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 SRD5A2P31213 254 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 DRD3P35462 400 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 KIR3DL2P43630 455 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 H2BFSP57053 126 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 RAC3P60763 192 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 CCL17Q92583 94 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 RBM14Q96PK6 669 aaKnown RBP11.6□□□□□ -0.55
TCOF1-214ENST00000515035 GPR132Q9UNW8 380 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 A0A0B4J293 547 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 LYZL6O75951 148 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 LEPROTL1O95214 131 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 GZMHP20718 246 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 CLDN18P56856 261 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 ZNF502Q8TBZ5 544 aa11.6□□□□□ -0.55
TCOF1-214ENST00000515035 FAM157AC9JC47 383 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 Q5BKY6 102 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 AQP10Q96PS8 301 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 MRPL18Q9H0U6 180 aaKnown RBP11.59□□□□□ -0.55
TCOF1-214ENST00000515035 WIPI2Q9Y4P8 454 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 A0A1W2PQD3 144 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 RFLNBQ8N5W9 214 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 ZPLD1Q8TCW7 415 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 NRTNQ99748 197 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 RASL11BQ9BPW5 248 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 TMEM208Q9BTX3 173 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 FAM60AQ9NP50 221 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 KCNE5Q9UJ90 142 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 KLHDC2Q9Y2U9 406 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 K7EQS6 105 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 CA11O75493 328 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 HKR1P10072 659 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 PPP1CCP36873 323 aaKnown RBP11.59□□□□□ -0.55
TCOF1-214ENST00000515035 KLF3P57682 345 aaPredicted RBP11.59□□□□□ -0.55
TCOF1-214ENST00000515035 IBA57Q5T440 356 aaKnown RBP11.59□□□□□ -0.55
TCOF1-214ENST00000515035 TXNDC17Q9BRA2 123 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 SCN1AP35498 2009 aa11.59□□□□□ -0.55
TCOF1-214ENST00000515035 J3QT63 122 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms