RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 ATP1B3P54709 279 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 KIAA1644Q3SXP7 199 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 C16orf47Q6ZP98 133 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 DNM1P46Q6ZS02 220 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 APCDD1LQ8NCL9 501 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 NOXO1Q8NFA2 376 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 OR4B1Q8NGF8 309 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 OTOSQ8NHW6 89 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 SYNPRQ8TBG9 265 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 PPP1R1CQ8WVI7 109 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 RNF183Q96D59 192 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 PSMG3Q9BT73 122 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 TMED7-TICAM2A0A0A6YYA0 188 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 K7ESF4 209 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 TNFRSF6BO95407 300 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 TACSTD2P09758 323 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 MMP9P14780 707 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 CFPP27918 469 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 HSD52Q0P140 79 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 ACKR1Q16570 336 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF766Q5HY98 468 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 WDR38Q5JTN6 314 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 SPATA31B1PQ5VZV4 182 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF66Q6ZN08 573 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 SHISA6Q6ZSJ9 500 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 SLC36A1Q7Z2H8 476 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 OR4K17Q8NGC6 315 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 VN1R17PQ8TDU5 208 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 C8orf44Q96CB5 159 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 SEC22AQ96IW7 307 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 C4orf45Q96LM5 186 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF587Q96SQ5 575 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 ASCL2Q99929 193 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 SLC25A21Q9BQT8 299 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 PRO3102Q9H379 93 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 HSPB8Q9UJY1 196 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 HHLA2Q9UM44 414 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 B9D1Q9UPM9 204 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 TMED7Q9Y3B3 224 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 WIPI2Q9Y4P8 454 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 WDFY4Q6ZS81 3184 aa6.45□□□□□ -1.38
PDLIM5-219ENST00000514743 PRSS37A4D1T9 235 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 OR6C6A6NF89 314 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 TIAF1O95411 115 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 RENP00797 406 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 PGCP20142 388 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 LMO1P25800 156 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 PPOXP50336 477 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 RPL27P61353 136 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 TMEM69Q5SWH9 247 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 CDCP2Q5VXM1 449 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 DPPA3Q6W0C5 159 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 NFAM1Q8NET5 270 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 DCUN1D4Q92564 292 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 FUT9Q9Y231 359 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 PI4KAP42356 2102 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 KIF26BQ2KJY2 2108 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 IGLV3-12A0A075B6K2 115 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 PLPP3O14495 311 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 TRAF3IP2O43734 574 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 HLA-DOBP13765 273 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 CTLA4P16410 223 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 CDK2P24941 298 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 GLIPR1P48060 266 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 ARL4DP49703 201 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 MIDNQ504T8 468 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF585BQ52M93 769 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 SPATA45Q537H7 98 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 TMEM128Q5BJH2 165 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 PRR31Q5SQ13 230 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 LY6G6FQ5SQ64 297 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 C1orf140Q5VVS0 124 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 TMPRSS12Q86WS5 348 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 DUX5Q96PT3 197 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 CDH20Q9HBT6 801 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 NXT1Q9UKK6 140 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 CACNA1EQ15878 2313 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 LY6G6EA0A0G2JKS1 128 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 SLC17A3O00476 420 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF207O43670 478 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 SRSF10O75494 262 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 NUDT14O95848 222 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 GP1BBP13224 206 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 FUT3P21217 361 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 SUMO1P63165 101 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 ADAM8P78325 824 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 HLA-DQA1Q5Y7H0 255 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 RHBDD2Q6NTF9 364 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 TCTEX1D1Q8N7M0 179 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 NHLRC2Q8NBF2 726 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 RNF138Q8WVD3 245 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 NKD1Q969G9 470 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 TXNIPQ9H3M7 391 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 PPDPFQ9H3Y8 114 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 CSDC2Q9Y534 153 aaKnown RBP6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 U3KQA8 63 aa6.44□□□□□ -1.38
PDLIM5-219ENST00000514743 FAM230AA0A1W2PPH8 454 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 DCDC2BA2VCK2 349 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 TMEM212A6NML5 194 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms