RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 RPEQ96AT9 228 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 GALMQ96C23 342 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 Q9N2K0 584 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 C12orf4Q9NQ89 552 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 C1RLQ9NZP8 487 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 ABRACLQ9P1F3 81 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
USP46-209ENST00000514536 MFNGO00587 321 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 SLC31A2O15432 143 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 HIST1H1DP16402 221 aaKnown RBP11.24□□□□□ -0.61
USP46-209ENST00000514536 DYNLT3P51808 116 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 ZNF134P52741 427 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 SCAND1P57086 179 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 MRPS15P82914 257 aaKnown RBP11.24□□□□□ -0.61
USP46-209ENST00000514536 RELBQ01201 579 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 FOXL1Q12952 345 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 MADCAM1Q13477 382 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 DIAPH2-AS1Q14236 149 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 GNMTQ14749 295 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 CDNFQ49AH0 187 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 MORN2Q502X0 79 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 MOB1BQ7L9L4 216 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 CROCCP3Q8IVE0 287 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 LINC00311Q8N616 119 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 IL1F10Q8WWZ1 152 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 OCSTAMPQ9BR26 566 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 RHBDL2Q9NX52 303 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 ETV7Q9Y603 341 aa11.24□□□□□ -0.61
USP46-209ENST00000514536 OOSP1A8MZH6 123 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 TMEM127O75204 238 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 CD24P25063 80 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 PPP1CCP36873 323 aaKnown RBP11.23□□□□□ -0.61
USP46-209ENST00000514536 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
USP46-209ENST00000514536 HTD2P86397 168 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 ARFRP1Q13795 201 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 CTF1Q16619 201 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 Q3ZCU0 254 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 AWAT1Q58HT5 328 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 CT45A1Q5HYN5 189 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 DHRS7BQ6IAN0 325 aaPredicted RBP11.23□□□□□ -0.61
USP46-209ENST00000514536 CCBE1Q6UXH8 406 aaPredicted RBP11.23□□□□□ -0.61
USP46-209ENST00000514536 C8orf31Q8N9H6 132 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 ZNF439Q8NDP4 499 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 CT45A3Q8NHU0 189 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 TOMM40LQ969M1 308 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 SLC25A38Q96DW6 304 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 JPT1Q9UK76 154 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 ELF5Q9UKW6 265 aaPredicted RBP11.23□□□□□ -0.61
USP46-209ENST00000514536 MGAT4AQ9UM21 535 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 SPATA2Q9UM82 520 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 TCF19Q9Y242 345 aa11.23□□□□□ -0.61
USP46-209ENST00000514536 A6NDX4 124 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 SERPINE3A8MV23 424 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 YPEL1O60688 119 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 SCTP09683 121 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 BRS3P32247 399 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 COMPP49747 757 aaPredicted RBP11.22□□□□□ -0.61
USP46-209ENST00000514536 RAG2P55895 527 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 HLA-DRB3P79483 266 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 ARL6IP1Q15041 203 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 CCDC144NLQ6NUI1 221 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 SLC25A48Q6ZT89 311 aaKnown RBP11.22□□□□□ -0.61
USP46-209ENST00000514536 TMEM219Q86XT9 240 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 SLC25A46Q96AG3 418 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 PHF21AQ96BD5 680 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 YPEL2Q96QA6 119 aa11.22□□□□□ -0.61
USP46-209ENST00000514536 POM121CA8CG34 1229 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 TRDCB7Z8K6 153 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 CHST1O43916 411 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 SCGNO76038 276 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 GABARAPO95166 117 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 NDUFA7O95182 113 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
USP46-209ENST00000514536 TALDO1P37837 337 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 MNDAP41218 407 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 REG1BP48304 166 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 ARHGDIBP52566 201 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 Q6ZSV7 163 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 IZUMO1Q8IYV9 350 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 OR4F5Q8NH21 305 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 ZNF230Q9UIE0 474 aaPredicted RBP11.21□□□□□ -0.61
USP46-209ENST00000514536 PITPNC1Q9UKF7 332 aa11.21□□□□□ -0.61
USP46-209ENST00000514536 TRAV18A0A075B6X5 111 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 HSD17B6O14756 317 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 RGS11O94810 467 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 GAPDHP04406 335 aaKnown RBP11.2□□□□□ -0.62
USP46-209ENST00000514536 FCGR3AP08637 254 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 IL3RAP26951 378 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 RPL5P46777 297 aaKnown RBP11.2□□□□□ -0.62
USP46-209ENST00000514536 RAB7AP51149 207 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 ZNF260Q3ZCT1 412 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 STEAP3Q658P3 488 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 LIAT1Q6ZQX7 453 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 DRAM1Q8N682 238 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 MAFIPQ8WZ33 124 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 RAB18Q9NP72 206 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.2□□□□□ -0.62
USP46-209ENST00000514536 A0A1W2PPI3 338 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 TMEM235A6NFC5 223 aa11.2□□□□□ -0.62
USP46-209ENST00000514536 TIMM23O14925 209 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms